Cynara cardunculus var. scolymus (artichoke): 112518315
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Entry
112518315 CDS
T05604
Name
(RefSeq) cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112518315
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112518315
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
112518315
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112518315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
Baculo_IE-1
Glyco_tranf_2_3
DUF6955
Motif
Other DBs
NCBI-GeneID:
112518315
NCBI-ProteinID:
XP_024981733
LinkDB
All DBs
Position
LG 9:9964518..9970496
Genome browser
AA seq
1693 aa
AA seq
DB search
MVIRAHDSPSSSPVRITVSSAGGFRNVGLTSPVQRTSISNSPLSGGEIRRLSGGRYLSMS
KDGADEYVAYTVHIPPTPEHQFMSSSEISPEYVKNHGNPNENRIKDTVFTGGFNSETRAH
ARRMKSVEEMTVVKSKLLCQVDGCDEKLVDKSSKSQCECGFRICNECYLDYCSSGGGVCP
GCKEPFREACEEDDGDYQPAMSEEKKDTVNPLPRRGGGIRLENNFSLVRSFKAPNQDFDH
TRWLFETNGTYGFGNAVWPREECHRGGGGLDQYESPPMFNDRRNRPLTRKVGISAAILSP
YRLLIVLRLVALALFLTWRIMHPNHEAIWLWLMSVICEVWFAFSWILDQLPKLCPVTRST
DLSVLKERFEPTRNNPKGLSDLPGIDIFVSTADAEKEPPLVTANTILSILAVDYPVDKLA
CYLSDDGGSLVTFEALAEAASFAGTWVPFCRKHEIEPRNPEAYFSQKGDPLKNKRRVDFV
RERRRVKREYDEFKVRINALPELIRRRSDACNAREELLAKKKQMELGGTLSESVKVPKAT
WMSDGNTWHGTWFSGEEDHSRGNHAGIIQLMLVPPAPECTYKTEEDPEDLIDTRNVDTRL
PMLVYVSREKRPGFDHNKKAGAMNAMVRASAIMSNGSFILNLDCDHYIYNSLALREGMCF
MLDRGGDKISYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRI
ALYGFSPPRATEHRGWFGGQKIKFSLRRMKKNKTETEEDAEMIMPIVDDQNNDEEDELKQ
ALIPERFGDSTYLIDSIAVAEFGGRLIHELRGKGSHGRPSGSLAVQREPIDRAAIEEAIK
VVTCFYEDKTEWGKRVGWIYGSITEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTD
RLIQVLRWATGSVEIFFSRNNALFASPRMKFLQRIAYFNVGMYPFTSIFLLAYCVLPALS
LFSGKFIVQSLNVTFLILLLAITVTLSMLALLEIRWSKITLHDWWRNEQFWLIGGTSAHP
VAVIQGLLKVIAGIDISFTLTSKPAAADDGEDEFAELYEFRFTMLMIPPVTIILLNVAAI
AVGVFRTMYSPFPEWSKLVGGVFFSFWVLSHLYPFAKGLMGRKGKISTIVYLWSMLICIV
ISLIFLYIHPPDGSRVTIKQVEDDDRRKKFAKSRRSFKSRRSFKSNYGDRSQLVRRNAKD
TSEGFSDTNVEEKKYAVVSKSFHDLLVDKTALIEEKPKEIRQVNFESVIGRGISMEISED
DDDEPRDKAVRWTEDDQKNVMDLGLLETERNKRLESLMEKRRSRKNLGFQDKVTENPSNG
QVSAIRITRINPFLEDNSRGMNTPGSAPSSFLSIRNPFDLPYDPHEEKPDLSGDNFHEEF
TVVHHKEPIFCRHQSFRLGAFTHPHPELAHDKHEISFYKDLAMNHKTFMGLGNYQKEGES
SSEQEADAIHQEDETERNTKELEEQSDDSYVERKADIIFFYGGDNKVGHAPSNSIVSDLQ
VEVSDEESCPCPDDLDVEKDHTNSLLGIKMDEHYAGQENNPGISSYSLDAAHQSPVSTRE
KDGSLPDQKTQDKQCVFEQIHHSEPSSSTDHGMENSPQLLNSATVESSNHLHESSGGNQR
SVDEAGPAGLTEVVASVGSSSPISVLQPMFSTDQASPYYFANDVQQQQQQSGDRNGLHQM
NNSEGNQLNERDP
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcagggctcatgattctccgtcgtcatctccggtgagaatcacggtctcttcg
gctggtggatttcggaatgtcggattgacgagtccggtgcagcggacttccatttcgaat
tctccactcagcggtggagaaattaggcgcttgagtggcgggaggtatctttctatgtca
aaagatggagctgacgaatacgttgcttacaccgttcatatccctccaacccctgaacac
cagtttatgtcgtcttccgaaatcagtcccgaatatgtgaaaaaccacggaaacccaaat
gagaatcggatcaaagacacggtttttacaggtggattcaattcggagactcgagctcat
gctcgtcggatgaaatcggtcgaagaaatgacggtggttaagtcaaagttgctctgtcaa
gtcgacggctgtgacgagaaattagtcgataaatcttcgaaatctcagtgcgaatgcggg
tttagaatctgtaacgaatgttacttggattactgttcgagtggcggtggtgtttgtcca
gggtgtaaagaaccatttcgagaagcttgtgaagaagatgacggtgattatcagccggcg
atgtcggaggagaaaaaagacaccgtcaatccgctgccgagacgcggtggtgggatccga
ttggagaacaatttttcattggtgcgatcgtttaaagctccaaatcaagatttcgatcac
acacggtggctgtttgagacaaatggtacttatggatttgggaatgcggtgtggcctagg
gaggagtgccaccgtggtggcgggggccttgatcagtacgagagtccgccgatgttcaat
gaccggaggaaccggccgctgaccagaaaagttgggatttctgctgccattctcagccct
tacaggctgctgatcgttttacggctggtggcgctggctctgtttctaacatggcggatc
atgcatccaaaccacgaagcaatctggctatggctgatgtctgtaatctgcgaggtttgg
tttgcgttttcgtggattctcgatcagcttccgaagctctgtccggtgacccgttccacg
gatctctcggttctcaaagaacggtttgaacccacccgaaacaatccaaaaggattatcg
gatcttccggggattgatatattcgtctcgacagctgacgcagagaaagaaccgccgctt
gtaaccgcaaacaccatcctctcgattctggctgttgattatccagtggacaagctggcc
tgttacctctcggatgacggtggatcgttggtgacattcgaagctttggctgaagccgct
agcttcgctggcacatgggtcccattctgtcggaagcacgagatcgagccaaggaacccc
gaggcatatttttcacagaaaggcgatccgttgaagaacaaacgacgggttgatttcgtt
agggaacggcgacgggtgaagcgggaatacgacgagtttaaagtgcggatcaacgcgttg
ccggagttgattcggcggcgatcggatgcgtgtaacgcacgagaagagcttttagcgaaa
aagaaacagatggagctcggcggaaccttgtcggaatcagtaaaagtcccgaaggcgact
tggatgtcggacggaaatacttggcacggaacatggttttcgggcgaggaagatcactcg
agaggcaaccatgccggaatcattcagcttatgttggttccaccggctcctgaatgtacc
tacaaaaccgaagaagatcctgaggatctgatcgacacccggaacgttgatacgaggcta
ccaatgcttgtttacgtgtcccgagaaaagcggcctggattcgatcacaacaaaaaagcg
ggggcgatgaacgcaatggttcgagccagtgccataatgtcaaatgggtcatttattctt
aacctcgattgcgatcattacatatataactcgttggctttacgcgaaggaatgtgtttc
atgctcgatagaggtggcgacaagatctcttacgttcaatttccgcagcgattcgaaggg
atcgaccctagtgaccgttacgcgaatcacaacaccgttttctttgatgtcagcatgaga
gctctcgacgggttacaaggtccgatgtacgttggaaccgggtgtattttccggagaatc
gctctttacgggtttagcccgcctcgagccaccgaacaccgtgggtggttcggcggccag
aagatcaagttttcattgaggagaatgaagaagaacaagactgaaaccgaagaagatgct
gagatgatcatgccgattgtagatgatcagaacaacgatgaagaagatgaactcaaacag
gccttgattcctgaacggtttggcgattccacctatttgatcgactcgatcgctgtggcg
gaattcggaggccgactgattcatgagttacgcggaaaaggcagtcacggaagaccatcg
gggtctcttgcagttcaacgcgagccaatcgatcgagccgcgatcgaagaggcaatcaag
gtcgtcacctgtttctatgaagataaaaccgaatgggggaaacgggtagggtggatctac
gggtcgataaccgaagatgttgtgaccggttaccggatgcacaatcgggggtggcgatcg
gtctactgtgtcaccaagcgggatgcttttcggggaacagctccgatcaacttaacggac
agattgattcaagttctccggtgggccaccggatctgtcgaaatcttcttctcgagaaac
aatgcccttttcgctagcccacgaatgaagtttctgcaacgaatcgcctatttcaacgtc
ggaatgtacccatttacctccattttcctcttggcttactgtgttctcccggcgctttcc
ctcttttccggtaagttcatcgttcaatcgctgaacgtaacatttctgatcctacttcta
gccatcaccgttaccctaagcatgctcgccctcttggaaatccggtggtctaagatcacc
ctccacgattggtggagaaacgagcagttctggttaatcggcggcactagtgcacatcca
gtggcggtgattcaaggtctgttgaaggtgattgccggaatcgacatctcattcacactg
acttcaaaaccagcggcggcggatgacggcgaagatgaatttgcagagctgtacgagttc
cgattcacgatgctgatgattcctccggtgacgattatcttattgaatgtggcggcgata
gcggtgggggtatttaggacgatgtacagtccattcccggagtggagcaagctcgtaggt
ggagtgttcttcagcttctgggtgttatcacatctgtatccatttgcaaaagggttgatg
gggagaaaagggaagatatcaacgattgtttatctgtggtcgatgttgatctgcattgtg
atatcgctgatatttctgtatatccacccgccggacggcagccgtgtcacgatcaaacag
gttgaagacgatgatagaaggaagaagtttgctaagtctcgaaggagtttcaagtctcgc
aggagtttcaagtcgaattacggtgatcgcagtcaacttgttcgacgaaatgccaaagac
accagtgaaggtttttctgatacgaatgttgaggagaagaaatatgctgttgtctcaaag
agttttcatgatcttttggtcgataagactgcgttgattgaggaaaagccgaaagagata
cgacaagtgaactttgaatccgttattggtagaggcattagcatggaaatctctgaagat
gacgacgatgagccaagagataaagcggttcgatggacagaagatgatcaaaagaatgta
atggatctcgggcttttggaaaccgaaagaaacaagaggttggagagtctgatggagaaa
agaagatcaagaaaaaatctgggttttcaggataaagtaactgaaaatcccagcaatggt
caggtttccgccattagaatcaccagaataaacccatttcttgaagacaattcacgcggt
atgaacactcctggttcggccccgtcttcttttttatcaatacgcaatccttttgatctt
ccttacgatccccacgaagaaaaaccggatctttctggagataatttccacgaagaattc
acagtcgttcaccacaaagaacccatcttttgtaggcatcaaagcttcaggttaggtgct
tttacacatccacatccagaactcgcacatgataaacacgaaatatccttttacaaagat
cttgctatgaatcacaagactttcatgggacttggtaattatcaaaaagaaggtgaatca
tcctctgaacaagaggcggacgctatccatcaagaagatgaaaccgaaagaaacacaaaa
gaacttgaagagcaaagtgatgattcgtatgtcgaacgaaaagctgatattattttcttt
tatgggggcgataacaaagtaggccatgctccaagcaactccattgtttctgatttgcag
gtcgaggtttcagatgaagaatcttgcccttgcccagatgatttggacgtagaaaaagat
cataccaattctttattgggtatcaagatggacgaacattatgcaggtcaagaaaacaac
cctggcatttcatcatacagtttggatgcagctcatcaatctccagtatcaacccgtgaa
aaggatggatcgctaccagatcaaaaaacccaagacaaacaatgtgtttttgaacaaatt
catcactctgaaccctcatcatcaaccgatcatgggatggaaaacagcccacaattgttg
aactcagctacagtagaaagcagcaatcacttacacgaatcatctgggggtaatcagaga
tctgtggatgaggctggaccagcaggtttgacagaagtggtggcttccgttggttcaagt
tctccgatatccgtcttgcagccgatgttttcaaccgatcaggcttcgccatattacttc
gcgaatgacgtacagcagcagcagcagcaatcgggtgatcgcaatgggttgcatcagatg
aacaattcagagggaaatcaattgaatgagagagatccatga
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integrated database retrieval system
