Cynara cardunculus var. scolymus (artichoke): 112518321
Help
Entry
112518321 CDS
T05604
Name
(RefSeq) protein NPGR2-like
KO
K21843
tetratricopeptide repeat protein 7
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112518321
Membrane trafficking [BR:
ccav04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
112518321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_11
TPR_1
TPR_17
ANAPC3
TPR_12
ARM_TT21
TPR_8
TPR_CcmH_CycH
TTC7_N
TPR_21
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
112518321
NCBI-ProteinID:
XP_024981738
LinkDB
All DBs
Position
LG 9:15485835..15492579
Genome browser
AA seq
735 aa
AA seq
DB search
MRNRNQSRVQNSSRLNRKFGKLVQCLCSGEQSRSADEMIPSPDSLATKDYSASAYSSQAT
GENHRKPDTGSIEEAELSLRESGSLNYEEARALLGRYEYQKGNIEAALHVFEGIDIATVT
PKIKNSLAKIGEPRKRRSHNYAIPPLSAHALSLLLEAIYLKSKSLQVLGRYKEAAQSCKV
ILDVVESSLPDGLPENFGADCKLQETLNKAVELLPELWQLADSPQEAILSFRRALLHHWN
LDEETIAKIGKDFAVFLLYSGGKDAIPPNLRSQMDSSFVPRNNIEEAILLLMILLKKINL
KKIEWDPSVIDHLSYALSISGGLGALGKQLEELLPAVIDRKERYFLLSLCYYGEGDGLSA
LNLLRNIYKHDDPNYVPALLMASKICGENPDFVEEGVNLAKRTIHLGNKCNAMVGVAYSL
LGISLLEHSRSALTDSERVDQQSEAIQCLETAGRLTRMVDSRIVYCLSLENAEQRKLDTA
LGLAKRLIKLEGGSRLRSWLLLARILSGQKLFSDAETIVNAGLDQSGKWDQGELLRTKAK
LQLAQGQVKNAIHTYTQLLAVLQVQNKSFRTRTRSKNLEVGGKHDKDLELETWHDLAMVY
ISLSQWLDAEACLSKSEAIDYYSSSRWHITGLLYEAKGLTREALKAYQNSLDIDPGHVQS
LVSMALVLRRVGGKSGPAIRSFLTEALRLDRMNSSAWYNLGHFYKDEGPMFIKEAADCFE
AATILEETEPVEPFR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaggaataggaatcagagcagagtacaaaatagcagtagattaaaccgaaagtttgga
aaattggtgcagtgcctgtgctcgggtgaacaatctcgtagcgcagatgagatgatcccg
tcaccagactcgctagcaacgaaagactactcagcaagtgcttattcttctcaagccaca
ggagaaaaccatagaaaaccagataccggtagtattgaagaagcagaactatcgcttcgc
gaaagtggttctctgaattatgaggaagcacgagcattgctaggaagatacgagtatcaa
aaaggaaacatagaagccgctcttcatgtatttgaagggatcgatatagctaccgtcact
ccaaagatcaaaaatagtcttgcaaaaataggggaacctcggaaaagacgttctcataac
tacgccattccaccattatctgcacatgcgctcagtttacttctcgaagcaatttacttg
aaatcgaaatcgttacaggttcttgggaggtataaagaagctgctcaatcgtgcaaagtt
atacttgacgttgtggaatcatcgttaccggatggcttaccggaaaacttcggtgctgac
tgtaaattacaggagactctgaataaagcagtcgagttgcttcctgagttatggcaactc
gctgattcacctcaggaagcgatcttgtctttccggcgcgcactcctccatcattggaac
ctcgatgaagaaacaatagcaaaaatcggaaaagattttgccgtttttcttctttatagt
ggaggcaaagatgcaatcccgccaaatctacgatcccagatggacagttcattcgtacca
agaaataacatcgaagaagctattctacttttgatgattttactaaaaaagattaatttg
aagaaaatcgagtgggacccgtctgtgattgatcatctttcttacgcgttgtcgatttct
ggtgggcttggggctctaggtaagcaattggaagaattgcttccggcggttatcgacaga
aaagaacggtactttcttttatctctttgttactatggagaaggtgacggtttatcggct
ttgaatttgctgagaaatatatataagcacgatgatccaaattacgtgccggctttacta
atggcgtcgaaaatttgtggggagaatcccgattttgtggaagaaggcgtaaatcttgcg
aaaagaacgattcatttgggaaataaatgcaacgcgatggttggagttgcatattcttta
ttgggtatttcgcttttggaacattcgagatcagctttgaccgattccgaaagagttgac
caacagtcggaggcgattcagtgtttagaaaccgccgggaggttgacccgaatggttgac
tcgagaatcgtttactgtttgagtttagaaaacgctgagcagaggaaactggatacggct
cttggtctggcgaaacggttgattaaactcgaaggagggtcccgccttcgaagttggttg
ttattggctcgaatcttgtcgggccagaaactgttttccgatgccgaaacgatcgtgaac
gcgggtttggatcaaagcggaaaatgggatcaaggagaattgttgagaaccaaagccaag
ctacaattagcacagggtcaagtaaagaatgccattcatacatacactcaacttcttgct
gttcttcaagttcagaataaaagttttcgaactcgaactcgatcgaagaatcttgaggtt
ggcggtaaacatgataaagatttggaactagaaacatggcatgatctggctatggtgtat
ataagcttatctcagtggctcgatgccgaagcatgtctttcgaaatccgaggctatcgat
tactactcttcgtctcgatggcatatcaccggtttgttgtatgaagcaaagggtctcaca
agagaagctctaaaagcttaccaaaattctctggatattgatcccggtcatgttcaaagt
ctcgtttcgatggcattggttctgagacgggttggcggaaagtctggacccgcgataaga
agcttcttgacggaagcattgcggctagaccgaatgaactcgtcggcgtggtataatctt
ggccacttctataaagacgagggtcctatgttcataaaggaagcggccgactgtttcgag
gctgctacgatactcgaggaaactgaacctgttgagccgtttagatga
DBGET
integrated database retrieval system
