Cynara cardunculus var. scolymus (artichoke): 112518443
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Entry
112518443 CDS
T05604
Name
(RefSeq) nuclear transcription factor Y subunit B-5-like
KO
K08065
nuclear transcription Y subunit beta
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112518443
Transcription factors [BR:
ccav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
112518443
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
TFIID_20kDa
CENP-S
Motif
Other DBs
NCBI-GeneID:
112518443
NCBI-ProteinID:
XP_024981903
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Position
LG 9:complement(13212653..13213497)
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AA seq
192 aa
AA seq
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MVHNIGSNNSGRQVLNFTYDATTSATQEIDHGVVKEQDRLLPIANVGRIMKQILPPNAKI
SKEAKETMQECVSEFISFVTGEASDHCRKEKRKTVNGDDVCWAMLNLGFDDYAEPLKRYL
HKIREFDGERANQNNKVGSSSSNEEIKDYLPNPHQETSSNYRSAGNQAPRKATVSTSPNL
FKFTVIDKRNIF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggttcacaatataggatctaataactcaggtagacaagtgttgaacttcacatatgat
gctacaacaagtgctactcaagaaatcgatcatggtgtggtgaaggagcaagatcgattg
ctaccgattgctaatgtgggtcgaatcatgaagcaaattcttcccccgaatgcaaagatc
tcgaaagaagccaaagaaaccatgcaagaatgtgtatcggagttcattagcttcgtgaca
ggagaagcttcagatcattgtcgaaaagagaagagaaagacggtcaacggagacgatgtt
tgttgggcgatgttgaatctagggtttgatgattatgcagaaccattaaagaggtatctg
cataagattagggagtttgatggtgaaagggctaaccaaaataataaagtgggtagcagc
agcagtaatgaagagatcaaagattatcttcctaatcctcatcaagaaacttcatcgaat
tacagatctgcaggtaaccaagctcctcgaaaagctactgtttccacatccccgaatctt
tttaaattcactgttattgacaaaagaaatatattttaa
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