Cynara cardunculus var. scolymus (artichoke): 112518493
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Entry
112518493 CDS
T05604
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00906
Carotenoid biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Module
ccav_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112518493
Enzymes [BR:
ccav01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
112518493
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GIDA
FAD_oxidored
HI0933_like
Thi4
Pyr_redox_2
GDI
FAD_binding_3
MCRA
Motif
Other DBs
NCBI-GeneID:
112518493
NCBI-ProteinID:
XP_024981971
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Position
LG 9:17407391..17413915
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AA seq
651 aa
AA seq
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MHLGSFSNCKGNMNLGFPNSQFLHDFKACQLGNSGFLYEPRCTKVRSSCFGSLKPLNYSV
FCEPRWSNQSVSCSKPLKTQNYSGKEVGFLKTVEKKKNLLSVRVKSVIGVSKVVEKDDVA
EVKMMDSGGGGGGYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGFYERDGY
TFDVGSSVMFGFSDKGNLNLITQALAAVGCKMEVIPDPTTVHFHLPNSLSVQVHRGYDDF
ISELTSKFPHEKEGILKFYNECWKIFNALNSLELKSLEEPIYLFGQFFKKPVECLTLAYY
LPQNAGAIARNFIKDPEVLAFIDAECFIVSTVSALQTPMINASMVLCDRHYGGINYPVGG
VGGIATSLTEGLVDYGSEILYRANVTSIIIDNGKAVGVRLSDGREFFAKTVISNATRWDT
FGKLLKKQDLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWKNLEEP
YGSIFLSIPTILDPSLAPEGRHILHIFTTSSIEDWQGLSTKDYEAKKELVADKIISRLEK
KLFPGLKSSIEFKEVGTPKTHRRFLARDSGTYGPMPRNVPKGLLGMPFNTTAINGLYCVG
DSCFPGQGVIAVAFSGVMCAHRVAADVGLEKKSQVLDAGLLGLLGWLRSLA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgggtagtttcagtaactgtaaaggaaatatgaacttggggtttccaaattct
cagtttttacacgacttcaaggcttgccaattggggaattcaggttttctttatgaacct
agatgcacaaaggtgagaagttcttgctttggatccttaaaacccctaaattacagcgtc
ttttgtgaacctagatggtcaaatcagagtgtttcttgttctaaacccttgaaaacccaa
aattattccggaaaggaggtgggatttcttaaaacagttgaaaagaagaagaatttgtta
tctgttagggtaaaatcggtgattggtgttagtaaagtggtggagaaagatgatgttgcc
gaggtgaagatgatggatagtggtggtggtggtggtggttatgatgcaattgtgattggt
tccgggattggtggattggtggcggccacgcagttggcggtgaagggggctaaggtattg
gtgctggagaaatatgtgattcctggtgggagttcagggttctatgagagggatggttat
acttttgatgttggatcatctgtgatgttcggattcagcgataagggaaacttgaatcta
ataactcaagcgttggcggcagttgggtgtaaaatggaggtgatacccgatccaaccact
gttcattttcatctaccgaatagcctttctgtccaagtgcatagaggatatgatgatttc
atttctgaactcacgagtaaatttccccacgaaaaggaagggattctcaaattctacaat
gaatgctggaagattttcaatgcgttgaattcactggagcttaagtcccttgaggaacct
atatatctctttggacagtttttcaaaaagcctgtggaatgcttgacactagcttactat
ttgccacagaatgctggagccatagctcgcaacttcataaaagatcccgaagtgctcgca
ttcatagatgccgagtgttttattgtgagcacggttagtgctttacaaacgcccatgatc
aatgcaagcatggttttgtgtgatagacattatgggggcattaattaccctgttggcggg
gtcggaggaattgcaacgtccttaacagaaggtttagttgattacggaagcgaaatactt
tacagggcaaacgttacaagcattatcatcgataatgggaaagctgttggagtgcgattg
tcggatggaagagagttctttgccaaaaccgtaatctcaaatgctactagatgggatact
tttggcaaacttttgaaaaaacaagatctaccaaaagaagaagaaaatttccaaaaagtt
tacgttaaagcgccttcttttctttctattcacatgggggtcaaagccgaggttttgcca
ccggatacggattgccaccattttgttcttgaggacgattggaaaaacttagaggagccg
tacgggagtatatttttgagcattccgactatactcgatccgtcgttggctcccgaaggg
cgtcatattcttcacatatttacaacctcgtctatagaggattggcaggggctttccaca
aaagattacgaggcaaagaaggaacttgttgcagacaagatcatcagcagactcgaaaag
aaactatttccgggtctcaaatcctccatcgaatttaaggaggtgggcacaccgaagaca
cacagacggttcctggctcgagatagcggcacgtacggaccgatgccacgtaatgttccc
aaaggcttgttgggaatgccttttaataccactgctataaacggtctttattgtgtgggc
gatagttgctttccgggacaaggcgttatagcggtagccttctctggcgtaatgtgtgca
catcgagtagctgcagacgttggactcgaaaagaagtcacaggtgttagatgccggtctc
cttggacttcttggttggttgaggtcgttagcgtaa
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