KEGG   Cynara cardunculus var. scolymus (artichoke): 112518496
Entry
112518496         CDS       T05604                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112518496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccav03041]
    112518496
Spliceosome [BR:ccav03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112518496
 Complex B
    112518496
 Complex C
   U2 SnRNP specific factors
    112518496
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_PARP14_3 DUF4523 xRRM
Other DBs
NCBI-GeneID: 112518496
NCBI-ProteinID: XP_024981978
LinkDB
Position
LG_9
AA seq 227 aa
MLTADIPPNQTIYVKNLNEKVKKEELKRSLYALFSQYGRILDVVALKTAKLRGQAWVVFS
EVTAASNAVRQMQNFPFYDKPMRIQYAKGKSDCIAKADNTFVPKDKRRKQEEKTEKKRDT
PQATNGVRTDNGTPAAFNRTGRPNTQETTAPNNILFVQNLTHDTTEDMLQLLFKQFPGFK
EVRMIDAKPGIAFVEFDDDNQSSTAMQSLQGFKITPQNSMSISYAKK
NT seq 684 nt   +upstreamnt  +downstreamnt
atgctgaccgcagatataccacctaatcagacaatttacgttaagaatctcaacgagaag
gtcaagaaagaagagttgaaaaggtctctctatgccttgttctcccagtatgggaggatt
ttggatgttgttgctttgaagacggccaaacttcgtgggcaggcatgggttgttttcagt
gaagtaactgctgccagtaatgcagttcgccagatgcaaaactttccattttatgacaag
ccgatgcgaatccaatatgccaaaggcaagtcagattgtattgcaaaagcagataataca
tttgttccaaaagataagagaaggaagcaagaggaaaaaactgaaaagaagagagatact
ccacaagctactaacggtgtgagaaccgacaacggaacccctgctgcttttaaccgaacc
ggaaggccaaatacgcaagaaacaacagcaccaaacaacatcctcttcgtacagaatcta
acacatgatacaacagaagacatgctgcagcttcttttcaaacaattcccgggttttaaa
gaagttcgaatgatcgatgcaaagccaggtatcgcgtttgtcgagtttgatgacgataat
caatcttcgactgcaatgcaatctctgcaaggcttcaagatcacgcctcaaaactcgatg
tccatcagttatgctaagaagtaa

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