Cynara cardunculus var. scolymus (artichoke): 112518540
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Entry
112518540 CDS
T05604
Name
(RefSeq) neutral ceramidase 2-like isoform X1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00600
Sphingolipid metabolism
ccav01100
Metabolic pathways
Module
ccav_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112518540
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
112518540
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
SWC7
Motif
Other DBs
NCBI-GeneID:
112518540
NCBI-ProteinID:
XP_024982037
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Position
LG 9:3930459..3940726
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AA seq
788 aa
AA seq
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MREAMKLPPPSRSVLQKLSTSMCLLVSLFLVLVKCRGASSESTNLIGLGSYDITGPAADV
NMMGYANIEQTTSGIHFRLRARTFIVAEPQGNSVVFVNLDVCMASQLVTIKVIERLKARY
GDLYTEDNVAISGIHTHAGPGGYLQYVVYIITSLGFVQQSFNALVDGIEKSITQAHENLR
PGSIFINKGELLDASINRSPSAYLNNPEEERRNYKYDTDKEMTLMKFVDEEWGPIGSFNW
FATHGTSMSRTNSLISGDNKGAAARFMEDWYNTDVMHKGFESQSLIKSGAYKVPRRISNI
IPDFHEHRKKLMDIASTYQSSPGRPVTRALSVAKRVRSTLRQAERPQFISAFCQSNCGDV
SPNVLGAFCIDTGLPCDFNQSTCNGRSELCYGRGPGYPDEFESTRIIGERQFEKAMELFQ
NASEQLKGTVRYRHTYIDFSDLPVQLSEVGESNELVRTCPAAMGFSFAAGTTDGPGAFDF
KQGDDEGNAFWKLVGGLLKKPDEKQINCQDPKPILIDTGEMHEPYDWAPSILPIQILQIG
QLVILSVPGEFTTMAGRRLRDAVKEVLTSGDKEESDNNVHVVIAGLTNTYSQYVTTFEEY
QIQRYEGASTLYGPHTLNAYIQEFNKLASSLISDKPVERGPQPPDLLDDQISLLTPVVMD
STPLSASFGDCKTDIPLDSIFKRGDIVKAMFWSACPRNDLMTEGTFALVEILQSGNNWEP
AYDDDDWCLKFKWSRPSKLSARSYATIEWHIPDAAVSGVYRITHFGASKSLFGSVKHFTG
SSTAFTVV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagctatgaagctgcctcccccctcgcgttctgtactacaaaagctatccacg
agcatgtgcttattagtgagcctttttttggtactagtaaagtgcagaggggcctcgtct
gaatctacgaacttgattggtcttggaagctatgacattacaggacctgctgcagatgtc
aatatgatgggatatgctaatattgaacaaactacctctggaattcatttcagactgcga
gctcgtacattcattgtcgcagaacctcaagggaattccgtggtatttgtgaaccttgat
gtttgcatggcttcacagcttgttacaattaaagtaatagaaagattgaaggcaaggtat
ggtgacctatatacggaggataatgttgccatcagtgggatccatactcatgctgggcct
ggaggatatcttcaatatgttgtatatattataacatctcttggttttgtacaacaatcc
ttcaatgcccttgtggatggcattgaaaaaagcatcacccaagctcatgagaatcttcgt
ccaggttctatctttataaataaaggagagctcttagatgctagcataaaccgtagtccc
agtgcttatctcaataatccagaagaagaaaggagaaattataaatacgacactgataaa
gaaatgacactcatgaagtttgtagatgaagagtggggtcctattggaagctttaattgg
tttgcgactcatggaacgtctatgagccgtacaaattcattgattagtggtgacaataaa
ggcgcagctgcacgatttatggaggattggtataatacagatgtcatgcacaaaggattc
gaaagccaatcactcatcaaatctggggcttataaagtacctcgaagaatctccaacata
attccagattttcatgaacaccgtaaaaagttgatggacattgcttccacctaccagtct
tctcctggaagacctgttacaagagctttaagtgttgcaaaacgagtcaggagtaccctt
aggcaggctgaacgccctcaattcatatctgcattttgtcaatcaaattgtggcgatgta
agcccgaatgtgcttggagcattttgcatagacactggcttgccctgtgatttcaatcag
agtacctgcaatggtcgaagtgaactgtgctatggccgtggtccaggttacccagatgaa
tttgagagtacacgtatcattggtgaaagacagtttgaaaaagctatggagctgttccaa
aatgcttctgaacaactgaaaggaacagtaaggtatcgacacacatatattgatttctct
gacctcccagtccaattgtcagaagttggagaaagtaatgaattggtcagaacatgccct
gctgccatgggcttttcttttgctgctggaaccactgacggacctggagcatttgacttc
aagcagggagatgacgagggaaatgccttttggaagcttgttggaggcttactgaaaaag
ccagatgagaagcagatcaattgtcaggatccaaaacccattctgattgacactggtgaa
atgcatgaaccatatgactgggctccgtccatacttcctattcagattttgcaaatcggg
caacttgttatcctcagtgttccaggagaattcacaactatggcagggaggcgcctccgt
gatgctgtcaaggaagttttgacatctggagacaaagaagaatcggataacaatgtgcat
gttgttatagcaggacttacaaatacatactcacaatatgtgactacatttgaggaatat
caaattcagagatatgagggagcttcgactctctacggtccacatacactgaatgcatac
attcaagaattcaacaagttagcatcttctctcattagtgacaaaccagtcgaacggggc
ccgcaaccccctgacctgctcgatgatcaaattagccttctgactccagttgtcatggat
tcaacccctctcagtgcaagcttcggcgactgtaagacggacattcctctagactcgatc
ttcaaacggggggatattgttaaagccatgttctggtcagcctgcccgaggaacgacctt
atgaccgaaggcacgtttgcattggtggagattttgcaatctggaaataactgggaaccg
gcatacgatgatgatgattggtgcctaaagttcaagtggtcgaggccttcaaagctaagt
gcccgaagctatgcaactatcgaatggcacattccggatgcagcggtttcgggcgtttac
aggataacacattttggtgcatcgaaatcgcttttcggatcggtcaaacatttcacgggt
tcttctactgcttttactgtagtataa
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