Cynara cardunculus var. scolymus (artichoke): 112518546
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Entry
112518546 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112518546
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112518546
Enzymes [BR:
ccav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
112518546
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
112518546
Ribosome biogenesis [BR:
ccav03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
112518546
23S rRNA modification factors
112518546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
DUF5720
Methyltransf_11
NotI
Motif
Other DBs
NCBI-GeneID:
112518546
NCBI-ProteinID:
XP_024982047
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All DBs
Position
LG 9:16826371..16832822
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AA seq
319 aa
AA seq
DB search
MALQMSKLPLFRRCGWLSSSNGVFLSEHSYLSQQPVTCTKARKNCSIRSFATLKSGKVIP
PKKKKRLDEVCLERFQQYSRNYIQSWILQGKVIVDGKVVLKAGHPVSDKAIVEIKAEIPK
YVCRAGHKLEAAIEQLGIDVAGKVALDSGLSTGGFTDCLLQYGASFVYGVDVGYGQVADK
VRRDERVSVIERTNLRYLSELPQKVDLVTLDLSFISILVVMPAVISLMKEEATLVTLIKP
QFEARRSQVGGGGIVRDPSVHQEVREKIIKGVEDLGFKCNGWIESPLKGAEGNIEFLACF
SRSNEKNVKESPVTTTTTV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaaatgtccaagctgccattgtttcgccgttgcggatggcttagttccagc
aatggagtcttcttatccgaacatagttatctctctcagcaaccagtgacatgcaccaag
gctcgtaagaattgttccatacgaagcttcgctactctaaaatcaggaaaagttatacca
ccgaagaagaagaagagactagatgaagtatgtcttgaaaggtttcagcagtatagtcga
aactacattcaatcatggatcctacaaggcaaggtaattgttgacggaaaagttgtactt
aaagctggacaccctgtctctgacaaagccatcgtggagatcaaggctgaaattccgaaa
tatgtatgtagagcaggacataagttagaagctgccattgaacaattaggcatcgatgtt
gctggaaaagtggctcttgattcggggctgtcaactggagggtttaccgattgcttgctt
cagtatggtgcttcttttgtttatggcgttgatgtaggatatggacaggtggcagataaa
gttcgtcgggatgagcgtgtatctgttattgaaagaacaaacttgagatatctttctgaa
cttcctcagaaagttgacttggtgacgttggatctttcattcatttctatacttgtggtc
atgcctgctgttattagtctgatgaaagaagaagctacattagttacgctgattaaacct
caatttgaggctcgtagatcacaagtgggaggaggtggaattgtgagagacccctcggtt
catcaagaggtgcgtgagaagatcatcaagggtgtcgaagatcttggattcaaatgtaac
gggtggatagagtctcctttaaagggtgcggaaggaaacatagaattcttggcttgcttt
agcagatcaaatgagaaaaacgttaaagaatcaccagttacaacaacaacaacggtgtag
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