Cynara cardunculus var. scolymus (artichoke): 112518561
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Entry
112518561 CDS
T05604
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112518561
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112518561
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
WASH_WAHD
CREPT
CTK3
PCRF
Pol_alpha_B_N
Motif
Other DBs
NCBI-GeneID:
112518561
NCBI-ProteinID:
XP_024982067
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Position
LG 9:10135731..10162422
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AA seq
520 aa
AA seq
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MEVLVSHLQWFFEARYERILESSYTAIRMSDDVFDGQMLADKLFKLNSSQQSIESLSRLC
ISQRKKARQIVEIWHKSFKSAQREQHVSFLYLANDILQNSRRKGNEFVNEFWKVMPSTLK
HVHEHGDENGKKAASRLVGIWDERRVFGSRGQNLKDEMLGKSPLPQLASNGKSSNPIKIV
KRDANSLRLKLAIGGTPEKIMTAFHLVHDENATEDTALNNCEGAVRRFGDLERDIESKGV
LPGPSLLEEIQEQENVLQECVNQLETAERTRTSLISQLKVALQDQELKLDAIHNQLQVAR
HQIDHAVNLRKKLVSPATQNQPGDMTIVDGQSMSFGTTHVTEEENKKAAAAAVAAKLAAS
TSSAQMLTSVLSSLVAEEAASISSGAGFSSTMFSPEKRPKLEKPMSVSDLSSNSDAVSSG
GYFNQTSFPPPPPPSITSPANNQFVQSSGLVMGGMPYGYGGASSSLPPPPPLPSHIAMGL
MRPATHHHQQTASSGYYRPPGIGFYGQSHQPTPPPPVPRQ
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaggttttggtttctcatctacagtggttttttgaagctagatatgaaaggattctt
gaatctagttacacagctatcaggatgagtgatgatgtttttgatggacaaatgttggcc
gacaagttgtttaaactcaacagttctcaacaaagtatagagtcattatctcgattgtgt
atttcacagaggaagaaagccagacagattgttgaaatatggcataaatcattcaaatct
gctcagcgagagcaacatgtttcttttctgtacctggccaatgacattttgcagaatagt
aggcggaagggcaatgagtttgtcaatgagttctggaaggtcatgccttcaacccttaag
catgttcatgaacatggtgatgaaaatggaaagaaagcagcatcaagactggttggcata
tgggatgaaaggagggtctttggatctcggggtcagaacttgaaagatgaaatgcttggt
aaaagtcctctccctcagttggctagcaatggaaagagctctaaccccatcaagatagtg
aagagggatgctaactcattgagacttaaattggctattgggggtaccccagaaaagata
atgactgctttccatttggtacatgatgagaatgctactgaagataccgccttaaacaac
tgtgaaggtgcagttcgtcggtttggagatttggagagagatattgaaagtaaaggagtt
ctaccaggcccttcattgctagaggagatccaggagcaagaaaatgtactacaagaatgt
gtcaaccaacttgaaacggctgaaaggactagaacgtcattgatttcccagcttaaagta
gcactacaggatcaagaattgaagctggatgctattcacaatcagttgcaggttgctcga
catcaaattgatcatgctgtgaatttgaggaagaaattagtatcacctgcaactcaaaac
caaccaggtgacatgacaattgttgatggccagtcgatgtcttttggaactacacatgtt
actgaagaagagaacaaaaaagctgcagcagccgctgttgctgcaaagcttgctgcttca
acgtcctctgcacagatgcttacatctgttctctcttctctagttgcagaggaggctgcc
tcaatcagcagcggtgctggattctcctctaccatgttctctccagaaaaaagacctaag
ctagaaaaaccaatgtcagtgtcagatttaagcagcaattctgatgctgttagttcagga
gggtattttaaccaaacatcatttccaccacctcctccaccatccataacttctccagct
aataatcaatttgttcagtcttctggtttagtgatgggggggatgccttatggatatggg
ggggctagcagcagcctaccgcccccaccccctttgccatcacatattgcaatggggttg
atgaggcctgccacccatcaccaccagcaaactgccagtagtggatactacaggcctcca
gggattggattttacgggcaaagccatcagcctacaccaccaccacctgtgcctcgccag
tga
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