Cynara cardunculus var. scolymus (artichoke): 112518569
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Entry
112518569 CDS
T05604
Name
(RefSeq) regulatory-associated protein of TOR 1 isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112518569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112518569
Membrane trafficking [BR:
ccav04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
112518569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
HEAT
WDR55
HEAT_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
112518569
NCBI-ProteinID:
XP_024982075
LinkDB
All DBs
Position
LG 9:complement(5567818..5595089)
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AA seq
1403 aa
AA seq
DB search
MALGDLMESRFSQSQSSMVAAVSNHLDGYSNSQHPNLNQSVLLQDGVVDGNRDRDSSSDS
VAAVQRMDNHNNRDKEDSDTVASTTSYGVGNGNAVVTGIAATSMAYLPQNVVLSELRHDA
FEVCTPSGPAESGLVSKWRPKDRMKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPF
SMAPQKALETIGKTLSFQYERWQPKAKYKIQLDPTVEEVKKLCTTCRKYAKSERVLFHYN
GHGVPKPTANGEIWFFNRSYTQYIPLPISDLDSWLKTPSIYVFDCSAAGMIINAFIELQD
WTPSSSSGTSSRDCILLAACEAHETLPQSHEFPADVFTSCLTTPIKIALRWFCTRSLLHE
SLDYSLIDRIPGRQTDRKTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVASLFR
NFLLAERIMRSANCSPVSYPMLPPTHQHHMWDAWDMAAEICLSQLPTLLEDPNAEFQPSP
FFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWAVDLA
LSVGIFPYVLKLLQTTTPELRQILVFIWTKILALDKSCQVDLVKDTGHTYFIRFLDSVEA
YPEQRAMAAFVLTVIVDGHRKGQEACIEANLIHVCLKHLQGGSAPNDTQTEPLFLQWLCL
CLGKLWEDFTEAQIIGLQANAPTVFSLLLSEPQPEVRASAVFALGTLLDVGFDSSRDVGD
DERDDDEKVGAEISIVKSLLNVVSDGSPLVRAELAVALARFAFGHNRHLKSIAAAYWKPQ
SNSVISSLPSFTVRGSVSGYNTPNQYSQIGPLSRVGGDNQATARDGRVSSSSPLATSGIM
HGSPLSDDSSQHSDPGTLNDCITNGVVNHTKPRQLDNALYSQCVSAMCTLAKDPSPRISS
LGRRVLSIIGIEQVVTKSVKPTTGSVRPGETSTTANSLAGLARSSSWFDMNGGHLPLTTF
RTPPVSPPRPSYLTGIGMRRVCSLEFRPHLMDSGLADPLLGSPGVPGASERSFLPQSTIY
NWSCSHFSKPLLTATDGTEEIIARREEREKFALEHITKCQHSSGSNLHNPIARWDTKFET
GAKTALLQPFSPIVVAADEGECIRVWNYEEATLLNSFNNHENPDKGISKLCLVNELDESL
LLVASSDGNVRIWKDYTSRGKQKLITAFSSIHGHRPGVRSVSAVVDWQQQSGYMYASGEI
SSTMVWDLDKEQLLSSIPLSSDCSISALAASHVHGGQYAAGFVDGSVRLFDIRTPDGIVC
VTRPHTRRVERVGGIERVVGIGFQPGLDPAKIVSASQAGDIQFLDIRNQSDAYLTIDAHR
GSLTALAIHRHAPLIASGSAKQLIKVFNLEGEQLGTIRYSPTFMAQKIGSVSCLGFHPYQ
ILLAAGAADACVSIYADEMSPPR
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagatttgatggagtctaggttttcgcagtcgcagtcgtcaatggtggca
gcggtttctaatcatcttgacgggtattccaattcgcagcatcccaatttgaatcaaagc
gttcttcttcaagatggagtagtggatggtaatagggatagagattcttcttctgattca
gtagctgcagtgcagaggatggataatcacaacaacagggataaagaagattccgacaca
gttgcttctactactagttatggagttggaaatgggaatgcggtggtcactgggatagcg
gctaccagtatggcatatttgcctcaaaatgttgttttgtctgagcttcgacatgatgca
tttgaggtttgcaccccatccggtcctgctgaaagtgggttggtctcgaaatggcgacct
aaggaccggatgaaaacaggatgtgttgctcttgttctatgtttgaatatcagcgtggac
ccgcctgatgttataaagatttcaccttgtgccagaatggagtgctggatagatccattc
tctatggcccctcaaaaagcacttgaaacaattgggaaaacattgagttttcagtacgaa
aggtggcaacccaaggccaaatacaagattcagttagatcctactgtggaagaagtgaag
aaactctgtactacctgtcgcaagtatgccaaatctgaaagggttctatttcattataat
ggtcatggtgtacctaaaccaactgccaatggtgaaatttggttttttaacaggagttat
acacagtatatccctttgcctattagtgaccttgactcatggttgaagactccatcgata
tatgtttttgattgctctgctgcagggatgatcatcaatgccttcatagagctccaggat
tggacgccatcgagttcttcgggaacatcatcaagggactgtattttactagcagcttgt
gaagcacatgagaccctaccacaaagtcatgagtttcctgctgatgtgtttacttcctgc
cttacaacccccatcaagatcgcattgagatggttctgcactcgttcgttactacatgag
tcgcttgattattcgcttatagacagaatacctggccgccaaactgaccgtaagaccctt
cttggcgagctgaactggatttttactgcagttacagacacaattgcctggaacgttctt
ccacatgatctatttcagagattattcaggcaagacctgttggttgccagtttgtttcgg
aactttttacttgcagagagaattatgcgttcggcaaattgttcgcctgtatcttatcca
atgttgcctccaactcatcagcaccatatgtgggatgcatgggacatggctgctgaaatc
tgcctttctcagctcccaacgttgcttgaggatcctaatgcggaattccagccaagtcct
ttcttcacggaacagttgacagcatttgaggtgtggcttgatcatgggtctgaacataag
aaaccacctgagcagttgcctattgttcttcaggttttactcagtcaatgccataggttt
cgtgcacttgtgcttctgggaagatttcttgatatgggtccatgggctgttgatttggcc
ttgtcagtaggaatttttccgtatgttctgaagctattgcagacaaccacacctgaactt
cgacaaattttagtgttcatctggacaaagattttagcacttgataagtcatgccaggtt
gatctggtgaaggatactgggcatacatattttatcaggtttttggatagtgtggaagcg
taccctgaacagcgtgccatggctgcatttgttttgactgtcattgttgatgggcacaga
aaggggcaagaagcctgtattgaagctaatctaattcatgtctgcttgaaacatcttcaa
ggtggttcagctccaaatgacacccaaactgagccactgtttttacagtggctatgtctt
tgtctgggaaagctatgggaagatttcactgaagcacagataataggcttgcaggcgaat
gctcctactgtattttcacttctactatctgagccccaacctgaggttagagcttctgct
gtttttgcattgggcactctacttgatgttggattcgactcatctagggatgttggagat
gatgaacgtgatgatgatgaaaaagttggggctgaaataagtattgttaaaagccttctg
aatgttgtttcagatggaagtccgttggtcagggcagagcttgcagtagctcttgcgcgc
tttgcatttggccacaacaggcacctgaaatctattgctgctgcatattggaaaccgcag
tctaactctgtgattagttctttgccttcatttactgttaggggttcagttagtggctat
aatactcctaatcagtattctcaaattggtccgttgtcaagggtgggaggtgacaaccaa
gcaactgcaagagatggcagggtttcctccagcagcccccttgctacatctgggataatg
catggttctccactctcggatgattcgtcacagcactccgatccaggcacactgaatgac
tgcattacaaatggggttgtcaaccatacaaaaccacggcagttagacaatgccttgtat
tcacaatgtgtatcagccatgtgtacgctagcaaaggacccatcaccacgcatttcaagt
ttgggccggcgagttctttccataattgggatcgaacaagttgtgacaaagtctgtcaaa
cccaccacaggcagtgtacgtccaggcgaaacctcaacgactgccaatagtcttgctgga
ttagctcgttcatcttcttggtttgatatgaatggaggtcatctacctctgacgacattt
agaactcctcctgtcagccctccacgaccaagttacttgacaggaataggaatgcggaga
gtttgttctcttgaattcagaccacacctaatggattctgggctagctgatcctctttta
ggttctcctggagttccaggagcttcagagcgcagttttcttcctcaatcaaccatctat
aactggagctgcagtcatttttcgaaaccacttcttacagcaactgatggcaccgaagag
attatagctaggcgtgaagaaagggaaaaatttgctctggagcacatcacaaagtgccaa
cattcttctggtagcaatcttcataatccaattgctcgctgggatacaaaatttgagact
ggtgctaaaacagctttgctgcaacctttctctccgatagtggttgcagcagatgagggt
gaatgcatcagagtatggaactacgaggaagcaaccttgcttaacagtttcaacaatcat
gaaaatccggacaaagggatatcaaaattatgcttggtgaacgagcttgatgaaagtttg
ctccttgtagcttcaagtgatggtaatgtccgtatatggaaagattacacttctcggggt
aaacagaaactcataactgccttctcctcaattcatggtcatagacctggtgtcaggagt
gtgagtgccgtagtagattggcagcaacagtctggctatatgtatgcttcgggtgaaatt
tcatcgaccatggtatgggacctggataaagagcaacttctaagttctattcctctatca
tcagattgcagcatttcggcattggctgcttctcatgtccatgggggtcaatatgcagct
ggctttgtggatggttctgtcagattatttgatattcgaacacctgacgggattgtttgt
gttacccgaccacatactcggagagtagaaagagttgggggtatagaaagagttgtggga
attggctttcaacccggacttgatccagcaaagattgtgagtgcatctcaagcaggagac
attcagttccttgatatcagaaatcaaagtgatgcctacttaacgattgacgcccacagg
ggttctctgacggctttagccattcacaggcatgcaccccttatagccagtggatcagct
aaacagctgatcaaagtgttcaatcttgaaggtgaacaattgggcacgattcgatactct
ccaacgttcatggcacaaaaaataggatctgttagttgtctagggttccatccataccaa
atattactagcggccggagctgctgatgcctgtgtttcaatctatgccgatgaaatgtca
ccaccgagataa
DBGET
integrated database retrieval system
