Cynara cardunculus var. scolymus (artichoke): 112518668
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Entry
112518668 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112518668 isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112518668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112518668
Membrane trafficking [BR:
ccav04131
]
SNARE
SNAP-25[C] (Qc)
Use1
112518668
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Use1
SH3BP5
PLCB1-4-like_EFh
FapA
BORCS6
Spore_II_R
Motif
Other DBs
NCBI-GeneID:
112518668
NCBI-ProteinID:
XP_024982212
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All DBs
Position
LG 9:complement(15073608..15076657)
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AA seq
238 aa
AA seq
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MGLSKTEINLRRLLATAPRQQNKIKLVHYVATLREQLEELATEQTPEGFPRVSKAMVNDY
SHKIEAIAAKLASSVSDTVPYHELRVKTSVKENIGKKEEESITLSPGLRRRLVPSSAEHR
GQDTFESSESSPVKLDAAAQSHIAKHRKLQEDLTDEMVGLARQLKESSLMMNKSIQNTER
ILDSTEKAVEHSLASTGRVNKQSTAIYNESFKTSCFTWLVMVVMMCIFVMVVLLIKAT
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgagtaaaaccgaaatcaatctgagaagattgctagcaactgctccacggcaa
caaaataaaatcaagcttgttcactatgttgctactttaagagaacagttggaagaactc
gccacagagcaaactccagaaggatttcccagagtttcaaaggctatggtgaatgattac
tcgcataaaattgaagcaattgcagccaaactggctagctctgtgtcggatactgtaccg
tatcacgagcttagagttaaaacatctgtcaaagaaaacatcggtaaaaaagaagaagaa
agtatcaccctttcgccggggttgagaagaagactcgtgccttcatcagctgaacacaga
ggtcaagatacttttgaatcgtctgaatcatctcctgtcaaattggatgctgcagcccaa
tcacatattgcaaaacacaggaagcttcaagaagatttgacagatgaaatggtgggtttg
gcgcggcaactcaaagagagtagtcttatgatgaacaaatccatacaaaataccgagaga
attcttgattcaaccgaaaaagcagttgaacatagcttggcaagcaccgggcgagtcaat
aagcagtctacggctatatacaacgagagtttcaagacttcatgcttcacatggctcgtg
atggttgtaatgatgtgtatcttcgtcatggtggttcttcttattaaagcgacttga
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