Cynara cardunculus var. scolymus (artichoke): 112518873
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Entry
112518873 CDS
T05604
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112518873
03012 Translation factors [BR:
ccav03012
]
112518873
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112518873
mRNA cycle factors
Stress granule specific factors
112518873
Translation factors [BR:
ccav03012
]
Eukaryotic type
Initiation factors
eIF-4
112518873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
112518873
NCBI-ProteinID:
XP_024982423
LinkDB
All DBs
Position
LG 10:18657360..18673077
Genome browser
AA seq
1786 aa
AA seq
DB search
MSFNQSRGDKNEPPQHRKLGRSGNAALQRNYSGGGGKGGGGGGSTTAPPSSSSSSSNRSF
KKVGNYAQGVQPRVNSPNINSNSDLLNSSTPGGTTVPNGAHLQLPARGASGAPAAGATIK
PSDVSTQKSTPGLPRAPQGNAAVPSSDATGPSTPTKGPADASRAFPLQFGSISPSLMNGM
QIPARTSSAPPNLDEQKQAQARLEALKATKIPTSAVLKQQLPKKDAGVIDQSNASEAHSV
PKAKKDVQALATPPATQSQKLSGPSIPGVPMQMSFHHSPLHVPYGGPNPQMQSQGMANSS
LPMPLPIPLMGNPPQVQQQVFVTGLQHHQMQPQGIIHQGQGLNFSSQMGPPQMPPQLGNI
GIGLGQHYPPQQTGKLGAHRKTVKITHPDTHEELRLDKRSDGYADGGSKGSGPRPHPHVL
PQSQPVPTFPPGHMVNYYSNSYNANSLFYPPPTSNPLTSAQTTPGSQAPRFYSQVTVKPA
ANAHDKVSDSSLPGSLPAIDKNELPKTPRTHGETSSTHSQRDPETSSGSSTQHPNYTLSP
MATKPTNATFGSFQSENLTNSSSTASAATVEDSVPLVNSEAEVAKEATVSKSSSFKEEPI
KPGKKVQYTPLDQVGGQSASISTSILETVKSSTPFTGTKEEVSETSKKVVPIAVTASAPG
SSLKGSSGEEGLKSIETIGSETNSDSSLKIEEPKAESAVSEDQGYVTTNEPEQHEVATSV
SDLDKNSGAMEVTMTKIETGSLDPAVPAINDDKSLPSASAADADVLSAETSLSLGTCRGD
DISSSDVSLSTLVNMGAEGAGNGESGTLDHGSAAVSVSVPDRPPSFDGEDVGNRASLISP
TSSGSMDKTLSDTSKAKGNTSKPKKKKKEFLKFADAQGTTSDLYMAYKGPEEKKETPSAE
IVENSSAITQKQASVDSSEKAVPCDEKRGHNKFEPDDWEDRADISTPKLETSFNGKSVDG
MAKKYSRDFLLKFAEQCTELPQGFEFTPDTADVVMSNVNVSREPHPSPGRGGDRVPPGAR
LDRRPSNVGHDDRWNKSQGPMGSGRMQSDVSYAGNTTNFKPMTGGNYGMSRNRTQTPGQY
GGGILSGTMQSPGPHMQRNNSDSDRWQRVAGNQKGLIPSPQTPMQVMHKAERKYEVGKVT
DEEQAKQRQLKGILNKLTPQNFEKLFEQVKQVNIDNAGTLSGVINQIFDKALMEPTFCEM
YANFCSRLAVELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANRTEEEGEVKQTEE
EREEKRIKARRRMLGNIRLIGELFKKKMLTERIMHECIKKLLGQYQNPDEEDIEALCKLM
STIGAMFDHPKAKEHMDVYFDTMFRLSNNMKLSSRVRFMLKDAIDLRKNNWQQRRKVEGP
KKIDEVHRDAAQERHAQSSRMARGSSFNSSTRSRQPMEFAPRGSNVLPSPNAQMGGFRGL
PQQQPRGYANQDARVEERSSFENRAVSFPLRPIGDDPITLGPQGGLARGMSVRGQSSMQS
MHLPEMPSPADPRRHAAGPNGYGSGSIPERQTSGPRDEFVPRYTSERLAPSPAYDQSHVN
RNAEHNFDRGMPSLPSPRVWMPTPSPNVPADKVWPEERLRDMSMEAIKEFYSARDEKEVV
LCIKELNAPSFYPSMISIWVSDSFERKDADRDSLAKLLVNLTKSQDGVLSQDSLIRGLES
VLASLEDSVNDAPKAAEYLGRIVGKMLLENVIPYKEVWQLIYEGGEEPGRLVEIGLAADV
VGVILEMITSEKGEAFLNEIRAGSNLHVEGFLPRNSTKASRLDKFI
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaatcaatcaaggggtgataagaacgagccgccacagcacagaaaattgggt
cgatccggtaacgctgccttgcaaaggaactactccgggggtggcgggaagggcggcggc
ggaggaggtagtaccaccgccccaccatcctcctcttcatcttcttctaatagaagcttt
aagaaggtgggtaattatgcacaaggagtacaacctagggtaaacagtcccaatataaat
tcgaattcggatttgttgaattcttctactcctggaggcactactgtacctaatggcgca
catttacaactgccagcacgaggtgcatctggtgctccagcagcgggtgctactataaag
ccatctgatgtatcaacccagaagagcaccccaggcctaccaagggctccacagggtaat
gcagccgttcccagttctgatgccactggtccttcgactccgacaaaggggccagcagat
gcttctagggcatttcctcttcaatttgggtcaattagtcctagtttaatgaatgggatg
cagattcctgcccgaaccagctctgccccaccaaatttggatgagcagaaacaggcccag
gctcgtcttgaggcattaaaagctactaaaattccgacttcagctgtcctgaaacagcag
ttaccaaagaaagatgctggtgtcattgatcaatctaatgctagtgaggcgcattctgtc
ccaaaagcgaaaaaagatgtacaagcattagctactccccctgcaacccaatctcaaaag
ctttctggcccctcaattcccggggttcccatgcaaatgtcatttcaccattctccactt
catgttccatatggtggtccaaatccacagatgcaatctcagggaatggcaaatagttcg
ttaccaatgccgctccctatacctttaatgggcaatccacctcaagtacagcaacaggta
tttgttacaggtctccaacatcatcagatgcagcctcaggggatcattcatcaaggtcaa
ggtctgaatttctcgtctcaaatgggacctccccaaatgcctcctcagttaggaaatatt
ggaattggtttaggacaacattacccgccacagcagacaggaaaacttggtgctcatcgt
aaaaccgtcaagattactcatccagacacacatgaggagctgagactagataaacggtcc
gatgggtatgcagatggtgggtcaaaaggttcaggccctaggcctcatcctcatgtgctg
cctcagtctcagccggttccaacatttcctcctggtcatatggtgaactactattctaat
tcctacaatgccaactcccttttctatccaccacccacttctaaccctttgactagtgca
caaactactcctggttctcaggcaccaaggttttatagccaggtgactgtaaaaccagca
gctaatgcacatgataaggttagtgattcatcattgccgggtagcttgcctgctattgac
aaaaatgagctccccaaaactccaaggacgcatggagaaacttcatccactcattctcaa
agagaccctgaaaccagcagtggaagctctacacaacatccaaactacactctgtcgcct
atggcaactaaaccaactaatgcgacatttgggtctttccagtccgagaatttaaccaac
tcttcctctactgcttctgctgctaccgttgaggattctgtgccacttgtgaatagtgag
gcggaagttgcaaaagaagcaacagttagcaagtctagctccttcaaagaggaaccgata
aagccaggaaaaaaggtccaatatacccccctagatcaggtgggtggacaatcagcctca
atttcaacgtctattttagagacagtaaagtcttcgactcctttcacaggaaccaaagag
gaggtttccgaaaccagcaaaaaagtagtgcctatagctgttaccgccagtgctcctggc
agctctttaaaaggtagtagtggtgaagaaggcctcaagtctattgaaacaattggtagc
gagactaattctgatagctctctcaagattgaagagccaaaggctgaatcggcagtgtca
gaagaccaaggatatgtgacaaccaatgagcctgagcaacatgaggttgctacatccgta
agtgatctagataaaaacagtggtgccatggaggtaaccatgacaaagatcgagactgga
tccttggaccctgcagtgcctgccatcaatgatgataaatctttgccatcagcttctgca
gcagatgctgacgttcttagtgctgaaacttcacttagtttggggacttgtcgtggggat
gatatctcaagttcagatgtttctttaagtacgctcgttaacatgggtgctgagggtgct
ggcaatggagaatctggtacattagatcatggttctgctgctgtttcagtttctgttcca
gacagaccaccttcttttgatggagaagatgtgggcaacagggccagcttgatatctcct
acatcatcaggttccatggataaaactttatcagatactagcaaagcaaagggtaataca
tctaaaccaaagaaaaagaaaaaagagtttctaaaatttgctgatgctcaggggacaact
tctgatctttatatggcgtataaaggtccagaggaaaagaaagaaactccatctgctgaa
atcgtagaaaactcttctgcgataacacaaaagcaggcatctgtcgattcatctgagaaa
gctgttccatgtgatgagaaacgtggccacaacaagtttgagcctgatgattgggaggat
agagcagatatttctactcccaaacttgaaacctcctttaatgggaagtcggtcgatggg
atggccaaaaagtattccagagacttcctgctaaaatttgccgaacagtgtactgaactt
cctcaagggtttgagtttactccggatacagccgatgtagtgatgtcaaatgttaatgtt
tctcgtgaaccacatccaagccctggtagaggtggtgatagagtaccaccgggagctcga
ctagaccgccgcccaagtaacgttggccatgacgacagatggaataaatcacagggacct
atgggttcaggaagaatgcaaagtgacgtcagctatgctggaaatacaaccaattttaaa
ccgatgactggagggaactacggcatgtcacggaacaggacacagacaccgggtcagtat
ggcggtggcatcttgtctgggacaatgcagtcccctggcccacatatgcaacgtaataat
tccgattctgacaggtggcaacgtgtggctggtaatcagaaggggttaataccctctccc
cagactccaatgcaggtgatgcacaaagcagaaagaaagtatgaagtgggtaaagtaaca
gatgaggaacaggccaagcaaaggcagttgaagggtatcctaaacaagctgactcctcaa
aacttcgaaaaactgttcgagcaagttaaacaagtgaatatcgacaatgctggaactctt
tctggtgtaatcaatcaaatattcgataaggctttaatggaacccactttttgcgaaatg
tatgccaatttttgctcacgtcttgctgtagagttgccggattttagtgaagacaatgaa
aaaatcacttttaagcgattacttttgaacaaatgtcaagaagaattcgagagaggagaa
cgggaagaagaagaagcaaacagaaccgaggaggaaggtgaggttaagcagacagaggag
gaaagggaggaaaagagaattaaggcacggagacgcatgttgggtaacatcagacttatt
ggcgagttgttcaagaagaaaatgttgaccgagagaattatgcacgaatgcataaagaaa
ttgttaggtcagtatcagaatcctgatgaggaagatattgaggcattgtgcaaattgatg
agcacaattggggcgatgttcgatcatcccaaagccaaggagcatatggatgtatatttt
gacaccatgtttagattgtcaaataatatgaaactttcttcaagagtgaggttcatgttg
aaggatgctattgatttgagaaagaacaattggcagcaaagaaggaaggtcgaagggcca
aaaaagatcgatgaagtacacagagatgctgctcaagaacggcatgcacaatctagtaga
atggctcgtggatcaagtttcaactcgtcaactaggagtcgtcaacccatggagtttgca
cccagagggtcaaatgtcttaccatctccaaatgctcaaatgggtggtttccgtggattg
ccccaacagcagcctcgtggttacgccaatcaagatgccagagttgaggaaagatcatct
ttcgagaacagggcagtttcatttccgttaagacccattggtgatgaccctataacactt
ggtccccaaggtggtcttgctagggggatgtcagttaggggacaatcttcgatgcaaagt
atgcacttacccgaaatgcctagtcctgcagaccccagacggcatgcagccggcccaaat
ggttatggttctggttctataccagagagacaaacttctggtccaagagatgaatttgtt
cctagatacacttcagagaggttggccccttcacctgcttatgatcagtcgcatgttaac
aggaatgccgagcacaattttgatcgaggtatgccttctttgccatctccacgagtctgg
atgcctactccttcaccaaatgttcctgcagataaggtctggccggaagaacgtttacgt
gatatgtccatggaggcaatcaaggaattttatagtgcaagagatgagaaggaagttgtt
ctatgcatcaaggaattgaacgcacccagtttttatccttcaatgatatccatctgggtc
agtgattcatttgagaggaaggatgccgatagggattcacttgctaagcttctcgtcaat
ctcacaaagtctcaagatggagttttaagtcaagactcacttattagaggattggaaagt
gttcttgcgagtttggaggacagtgtgaatgatgctcctaaagcagcagagtatctcggg
agaatcgtaggaaagatgctattggaaaatgtgataccatataaagaagtgtggcagttg
atatatgaaggtggagaggagccaggacgactggttgaaatagggcttgcggctgatgtt
gttggagtgattctggagatgattacatcggagaaaggtgaagcatttttgaacgagatt
cgtgcaggctctaatcttcatgtggaggggtttctacctcggaatagtacaaaagcatcg
agattagacaagttcatttag
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integrated database retrieval system
