Cynara cardunculus var. scolymus (artichoke): 112518992
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Entry
112518992 CDS
T05604
Name
(RefSeq) DNA topoisomerase 1 alpha-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccav03032
]
112518992
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
112518992
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Topoisomerases
112518992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
112518992
NCBI-ProteinID:
XP_024982610
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Position
LG 10:complement(616757..628061)
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AA seq
791 aa
AA seq
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MNYSSDEDDKPLVFRRSSKADKVKCSSQSLRPSPKPSNDLTDSEDDKPLSFRLSTVSKGN
TNHAKKGSCMNVSPLPKPQVKDEDSDDEKPLSSKYISKPNVVSSISKHSGSNNDKTLTSK
VHQNGSASRDNQSRSTGSIKRPLDEERSSSQSLAKKPKLSESSTPINRKQVPLKAETESD
DDEEDDVPISQRIKNHAPSGSKSSSVKHKVTKKNSSLKETNKKSKKVVKNSKYSKPSKVP
PGSGEGQKWTSLVHSGVIFPPAYKPHGVKILYKGKPVDLTPEQEEVATMFAVMLDTDYMT
KPKFKENFWDDWRKILGRNHTIQNLDDCDFKPIYEWHQTEKEKKKQMSTEEKKALKEEKM
KLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIHPSDITINIGKDAPI
PECPIPGESWKEIRHDNTVTWLAYWNDPINSKEFKYVFLAASSSLKGQSDKEKYEKARML
KGYIQGIRNAYTRDFGNKDLTKRQVAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVEN
VEPKPPNILKFDFLGKDSIRYQNEVEVELPVFKAIQQFRTGKQGTDDLFDKLDTSKLNAH
LKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAQNLVVYQHANKEVAIICNHQRTVS
KSHSAQMTRLNEKIDELKGVIKELETDLVRAKKGKPPLKNSDGKPKRNLNPEALAKKIAQ
TNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKVFNKSLLAKFA
WSMDVDPNFRF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaattattcatctgatgaggatgataaacccttagtttttagaaggagctcgaaagct
gataaggttaagtgttcttcccagtctttaagaccttctcctaaaccgagcaatgactta
acagattctgaagatgataaaccactgagttttagactttcaactgtatcaaaggggaac
accaatcatgctaaaaaagggtcatgtatgaatgtgtctccacttccaaaaccacaagta
aaagatgaggattctgatgatgaaaaacctttgtcgtcaaagtatatatccaaacccaat
gtggtatcatctatcagtaagcattctggttctaacaatgataaaacactcacgtcgaaa
gttcatcaaaatggttctgcatcaagggataatcaatctaggagtactggctcgattaag
agaccactagatgaggaaagatcttcaagtcagtcattggctaaaaagccaaagctttca
gaatcttcaacaccaatcaaccgcaaacaggtacctttaaaagcagaaactgagtcggat
gatgatgaggaagatgatgttcccatatcacaaagaatcaagaaccatgccccatcaggt
agtaaatcttcatctgtaaaacataaagtgacaaaaaagaattcctcgttaaaagaaacc
aacaagaagtcgaagaaggtggtgaaaaattcaaagtattctaagccatcaaaggtcccc
cctggctctggtgaagggcagaagtggacaagcttggttcatagcggtgtaattttccca
cctgcatacaagcctcatggggttaagattctctacaaagggaagcctgttgatttgact
cctgaacaggaggaggttgcaacaatgtttgcagtgatgttagatacagattacatgaca
aaaccaaagttcaaagagaatttctgggatgactggcgaaagatactgggaagaaaccac
acaatacagaatttggatgactgtgatttcaaaccaatttatgaatggcatcagacggaa
aaggagaagaagaagcaaatgagtaccgaagagaagaaggccttgaaagaagagaagatg
aagctagaggagaagtatatgtgggcaattgttgatggcgtcaaagagaaggttgggaat
ttccgagttgagccacctggattattccgaggccgtggagaacatccaaagatgggaaag
ctgaaaaaacgtatccatccaagtgatattaccataaacattggaaaggatgctccaatc
cctgaatgtccgattcctggtgaaagctggaaagaaattaggcatgataatacggtcact
tggttagcatattggaatgacccaatcaattcaaaggaattcaagtatgtgttcttagct
gctagcagttctttgaagggtcaaagcgataaggaaaaatatgagaaggcgaggatgttg
aagggctacatacaaggcattagaaatgcttacactagagattttggaaacaaggatctg
acaaagaggcaagtagcagtggctacatatctcatcgataaactggcactcagggcggga
aatgagaaggatgatgatgaagctgatacagtaggctgctgcacgttgaaagtggaaaat
gtcgagccaaaacctccaaatatcttaaagttcgactttcttggtaaagattctataaga
tatcaaaatgaggttgaagtagagcttcctgtgttcaaagcaattcaacaattccgaaca
ggtaaacagggtactgatgatctttttgacaagctggatacaagtaaattgaatgctcat
ctaaaggaactcatgcctggccttactgcaaaagttttccgtacttataatgcgtccatc
acattggatgatatgttgagtagggaaacgaagggaggagatgttgctcaaaatctagtc
gtttaccaacatgcaaacaaggaggttgcgatcatatgtaaccatcaacgtactgtttca
aagtctcatagtgctcaaatgacgaggttgaatgagaagatagacgaattgaagggtgtt
ataaaagaattagaaaccgatttggttcgtgcaaagaaagggaagcctccattgaagaac
tctgatggcaaaccaaagaggaacttgaaccccgaagcgctagcgaagaagatagctcaa
actaacgctaaaattgagaaaatggaacgtgacaaagagaccaaggaagatttgaaaaca
gtagcattgggcacttcaaagataaactacctcgaccctaggataacagtggcgtggtgt
aaacgacacgaagttcccattgagaaggttttcaacaagtctctactagcgaagtttgcc
tggtcgatggacgtggatcctaatttcagattctga
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