KEGG   Cynara cardunculus var. scolymus (artichoke): 112519004
Entry
112519004         CDS       T05604                                 
Name
(RefSeq) splicing factor 3B subunit 2-like
  KO
K12829  splicing factor 3B subunit 2
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112519004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccav03041]
    112519004
Spliceosome [BR:ccav03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112519004
 Complex B
    112519004
 Complex C
   U2 SnRNP specific factors
    112519004
SSDB
Motif
Pfam: DUF382 PSP Prion_octapep
Other DBs
NCBI-GeneID: 112519004
NCBI-ProteinID: XP_024982638
LinkDB
Position
LG 10:1856822..1868840
AA seq 583 aa
MTAEVANGVLGTPSFNPNGGVNHQTNMNQASKKSRETDRRRRRRKQKKNKSAVGEDTNTD
ASVTGDDNAKENSDPQKVVEQVEVEYIPEKAELDGYLDDEFRKVFEKFTFKETAPSEEND
KNEETAANAASNKKASSDSEEEEQDAQQKDKGGVSNKKKKLQRRMKIAELKQISTRPDVV
EVWDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK
IRQAYIEKEDNKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGK
EFEVKLREMKPGTLSHELKEALGMPDGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPG
ASFGYHPGGWGKPPVDEFGRPVYGDVFGQQEELPNYEEEPVDKTKHWGDLEEEEEEEEEE
EEVEEQYEEEDLEDGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKEEKI
APGTLLGTTHTYVIGGAPQDKPSGKRVDLLRGQKTDKVDVSLQPEELELMDNVLPAKYEE
AREEEKLRSQREDFSDMVAENEKKRKRKMQEKDSKSKKKDFKF
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgacggccgaagttgccaacggcgtcttagggactccgtcctttaaccctaacggcggt
gtgaaccatcagaccaatatgaatcaggcgtcgaagaaatcacgagaaaccgaccgccgt
cggaggcggcggaaacagaagaaaaacaagtccgcagtaggagaagataccaacactgat
gcttctgttaccggagatgataatgcaaaagagaactccgatcctcagaaggttgtggag
caagttgaagttgagtacattccagaaaaagcagaacttgatggttacttagacgatgaa
ttcagaaaggtcttcgagaaatttacttttaaggaaacggctccctccgaggaaaacgac
aagaatgaagagactgctgccaatgcagcatcaaacaagaaagctagttctgattcagag
gaagaagaacaagatgcccaacaaaaggataaaggtggcgtctctaataaaaagaaaaag
cttcaacggcggatgaagattgctgaactgaagcagatcagtacaaggccagatgtagtt
gaggtgtgggatgctacctcagctgatccaaagttgctggtttttctcaaatcatatcgc
aatactgttcctgtgccaaggcattggtgtcagaaaaggaaatttttgcaggggaagcgg
ggtatcgagaagcaaccgtttcaacttcctgactttattgcagctacagggattgagaaa
attagacaagcttacattgaaaaggaggacaataagaagcttaaacagaagcagcgtgag
aggatgcaaccaaaaatgggaaagatggatattgattatcaggtacttcatgatgcattt
ttcaaataccagaccaagccaaagttgacgtcacatggtgacctatatcatgaaggaaaa
gagtttgaggtgaagcttagagagatgaagcctggaaccttgtcacatgaattaaaagaa
gctttaggcatgccagacggtgcccctcccccatggcttattaacatgcagagatacggt
cctccaccttcttatccacatttaaaaattccgggtcttaatgctcctattccacctggc
gctagctttggttatcatcctggaggttggggcaaaccacctgttgatgagttcgggcgt
cctgtctacggggatgtttttggacaacaagaagagttacctaactatgaggaagagcca
gttgataagaccaagcactggggtgatttagaggaagaggaggaggaggaggaggaggaa
gaggaagtggaagagcaatacgaagaagaggacttggaggatggcattcaatcagttgac
agcctatcaagtacccccactggtgttgagactccagatgttattgaccttcgcaagcag
cagaggaaagaacctgaaaaacctttgtaccaggtgctggaagaaaaagaagagaagata
gctccaggaacattgcttggaacaacacatacctatgtgataggtggtgcccctcaggac
aagccatctggtaaaagggttgatttgcttagaggtcaaaaaacagataaggttgacgtt
tcgttacagcccgaggagttggagctcatggacaatgtcttgcctgccaagtacgaggaa
gcccgagaggaagaaaagcttcgtagtcaaagggaggacttcagtgacatggttgcagag
aacgaaaagaagagaaagcggaaaatgcaagaaaaggacagcaagtcgaagaaaaaggat
ttcaagttttaa

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