Cynara cardunculus var. scolymus (artichoke): 112519045
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Entry
112519045 CDS
T05604
Name
(RefSeq) zinc finger CCCH domain-containing protein 30-like
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
zf-CCCH_4
zf-CCCH
Ank_4
zf_CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
112519045
NCBI-ProteinID:
XP_024982739
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Position
LG 10:15602119..15606427
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AA seq
733 aa
AA seq
DB search
MCSGPEQNKSASSSTTSAIDKKFNKMVMSPLTVETEDSFSSLLEYAANNDSEGFKRSIEN
DLSAIDEVGLWYVRKKGSKQIVLEHRTPLMVASTYGSVSVLKLIIAQPKVDVNFSCGPDK
CTALHCAASGGSVDAIEVVKLLLSVGADPNIEDANGHRPIDVIIVPPKLSGVRASLEELL
MNNAFDGSVGDCKLTVSVTTSSSWSPTLSSSPDNGSPCSPSELVSSPMMSKFNDIPMNST
SEKKEYPIDPSLPDIKNSIYSTDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDP
RKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCARRVCFFAH
TPEELRPLYVSTGSAVPSPRSSAAGASVMDMAAALNLLPGSPSSVSVMSPAFNQQMSPSG
NGGPHSSVAWPQPNVPTLHLPGSNLQSSRLRSSLSARDIPPDDLSMLQDFESQQLLNDLA
CFSQSRPGSLSLNRPTRSKTLAPANLEDLFSAELTSSPRYSDQAASSGVFSPSHKSAVLN
QFQQQQSVLSPINTNVFSPKNVDHALLQASFGVSSPGRMSPRSMDPISPMGARLSAFAQR
EKQHQQQLRSLSSRDLGTNSPFNVGSPVNTTTSSSWSKWGSPTGKVDWSVNVDDFGKLKR
SSSFELNNNGAEEPDLSWVQSLVKESPPEMMKNKSAAPAPSGSAAAPSGEVESSDHSVLG
AWLEQMQLDQLVA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagtggccctgaacagaataaatctgcttcgtcgtccaccacatcagcaatagat
aaaaaatttaacaaaatggtcatgagtccactaactgtggagaccgaagattctttttcc
agtttacttgaatatgcagctaacaatgactctgagggtttcaagcgttcaattgagaat
gatctttcagcaattgatgaagttggactctggtatgtgcgcaagaaaggttcaaagcag
atagtcctagagcatcggactccattgatggttgcttctacgtatggaagcgtgagtgtt
ctgaaattgataatagcacagcccaaggttgatgtaaatttttcttgtggcccggataag
tgcactgcccttcactgtgcagcctctggtggctctgttgatgctattgaagtagttaag
ttgcttctgtctgttggtgctgatccaaacattgaggatgctaatggacatcggcccatt
gatgtgattattgtacctccgaagctgtctggggttagagcttcgcttgaagaacttctc
atgaacaatgcatttgatggatcagttggcgactgcaagctgactgtatctgtcactaca
tcaagctcttggtccccgaccctatcatcttcgccggataatggttctccttgctctcct
tcagagttggtatcctctccaatgatgtcaaaatttaatgacattcctatgaactccaca
tcagaaaagaaagagtatccaatcgacccatctctccctgacattaaaaacagcatttat
tctactgatgagttccggatgttttcattcaaggtccgcccttgctcaagggcgtattcc
catgattggactgagtgcccttttgttcatccaggagaaaatgcacgcagaagggacccc
aggaagtaccattatagctgtgtaccttgccctgatttcaggaaaggtgcttgtagacga
ggggatatgtgtgaatatgctcatggcgttttcgagtgctggctccatccagctcaatac
cgtacacgcttatgtaaagatggtacaagctgtgctaggcgtgtttgcttttttgcccat
actcctgaggagcttcggccactgtatgtttccaccggttcggctgttccatctcctagg
tcatctgccgccggtgctagtgtcatggacatggctgcagctttgaaccttctgcctggt
tcaccttcatctgtctctgtgatgtctcctgctttcaatcaacagatgtccccatctgga
aatggtggtccacactcttctgttgcttggcctcagccaaatgtgccaacccttcacctt
ccaggaagcaacctccaatcaagccggcttagatcctctcttagcgcccgagacattcca
ccagatgatttgagcatgttgcaagattttgagtcgcaacaactgctaaatgacttggct
tgtttctcacaatcgcgccctggttcactctctttgaaccgtcctactcggtccaaaaca
cttgctcctgcaaatcttgaagatcttttttcggctgagctcacttcttctcccagatat
tctgaccaggctgcatcttctggcgtcttttcgccatcacacaaatctgctgttctcaat
cagttccaacagcagcaaagcgtgctttctcctatcaatacgaatgtcttctcaccaaag
aatgttgaccatgccttgttgcaggcttcatttggtgtgtcatcacccgggagaatgtcg
ccaagaagcatggatccaatatctccaatgggtgccaggctttctgcttttgctcagcgt
gagaagcagcaccaacaacagctacgtagtctcagctcacgggatcttggtacgaacagt
cctttcaatgttggatcgcctgtgaatactactacttcctcctcttggtctaaatgggga
tctccaactgggaaagtagattggtctgtgaatgtggacgattttgggaaactgaaaagg
tcgtcttcctttgagctcaacaacaacggtgctgaggagcctgacctgtcatgggtgcag
tctcttgtgaaggaatcaccacctgagatgatgaaaaacaagtcggcggcaccagcacct
tctggtagtgctgctgcaccatccggtgaggttgaatcaagtgatcattcagtattaggt
gcatggctggagcagatgcaacttgatcagctcgtagcttaa
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