Cynara cardunculus var. scolymus (artichoke): 112519049
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Entry
112519049 CDS
T05604
Name
(RefSeq) ras-related protein RABA1c
KO
K07904
Ras-related protein Rab-11A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112519049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112519049
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112519049
04031 GTP-binding proteins [BR:
ccav04031
]
112519049
Membrane trafficking [BR:
ccav04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
112519049
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112519049
Exosomal proteins of colorectal cancer cells
112519049
GTP-binding proteins [BR:
ccav04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
112519049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_14
AAA_22
AAA_16
ABC_tran
AAA_24
KAP_NTPase
TniB
PduV-EutP
AAA_21
Motif
Other DBs
NCBI-GeneID:
112519049
NCBI-ProteinID:
XP_024982746
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All DBs
Position
LG 10:1904569..1909136
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AA seq
215 aa
AA seq
DB search
MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSK
VIKAQIWDTAGQERYRAITSAYYRGAVGALLVFDVTRHATFENVERWLKELRDHTDPNIV
VMLIGNKSDLRHLVAVSTDDGKSFAERESLYFMETSALDATNVESAFAEVLTQIYRIVSK
KAMDAAEDLNVPSKGEKIDVGKEVSAMKSVGCCSS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatacagagctgaggatgactacgattaccttttcaaggtagttctgattggg
gattccggtgttggaaaatcgaacttgctttcgagattcactaggaatgagtttagcctc
gagtccaaatcaacaattggtgttgaattcgctacgagaagcttgaatgtcgatagcaag
gtcatcaaggctcagatttgggacactgctggtcaagaaaggtatcgtgcaattactagc
gcctactatcgaggagcagttggagcacttcttgtgttcgatgtcacaaggcacgccaca
tttgaaaacgttgagcggtggttaaaggaactgagggatcacactgatccaaatatcgtg
gtcatgcttatcggcaataaatcagaccttcgacacttggtggccgtgtcaaccgacgat
ggaaaatcttttgccgaaagagaatccctttacttcatggaaacgtccgctctagatgct
acgaacgtggagagcgcttttgccgaagtcctgactcaaatctaccggatcgttagcaaa
aaagccatggatgctgctgaagatttgaatgttccgtcgaaaggtgagaaaatcgatgtg
ggtaaagaggtttctgctatgaaatcagttggatgctgttcatcttga
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