Cynara cardunculus var. scolymus (artichoke): 112519055
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Entry
112519055 CDS
T05604
Name
(RefSeq) rhomboid-like protein 15 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112519055
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
112519055
Peptidases and inhibitors [BR:
ccav01002
]
Serine peptidases
Family S54: Rhomboid family
112519055
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
UBA
DUF1751
UBA_7
Motif
Other DBs
NCBI-GeneID:
112519055
NCBI-ProteinID:
XP_024982760
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Position
LG 10:complement(25356655..25364909)
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AA seq
410 aa
AA seq
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MRSNIVSEAGFPTRFKQWWEGIPFLTSVVVAVCAVIYLVCLLVGYDSFAEVCFWPSAVIS
KFQVYRVFTSIFFHGSILHLVFNMLALVPLGSELERVMGSIRLLYMIVLLATSSAIFHLL
ITLIAAYNPIHSYYHFMDECAIGFSGVLFSMIVIETSLNGVQSRSVFGLFNVPAKLYPWI
LLVVFQLLMTNISLLGHLCGILSGFAYTYGLFNFIIPGSSFYSGIESSSWLSTCVRRPKY
IMCTGGEPSGYIPTYSTRNTASSESLSGNMWSNLSSWMPRREVPSQSTEESSRFPGRGRT
LGAPQMETVSNNSSDSSLQARLLETPVRPSTQEPIGAGQQRNDRRQPGIDNTAAATMGSP
VSQVTVASDEDIQKLLAMGFDKTQVEVAIAAADGDVNVAVEILMSQQVSI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaaacattgtatcggaggcagggtttcctacaagatttaagcaatggtgggaa
ggcataccattccttacttctgtggtggttgcagtttgtgccgtgatttacttggtttgt
cttttggttggctatgactcttttgcagaagtatgtttctggccctctgctgttatttca
aagtttcaagtttacagggttttcacttctatattctttcatggttcaatacttcatctc
gtattcaatatgttggccctggttcctttaggctcagagctggagagagttatgggctca
atccgtttgttgtacatgattgttctgttggctacaagcagcgctatttttcaccttcta
attacattaatagctgcctacaaccccattcactcgtattaccattttatggatgagtgt
gcgattggcttctctggcgttctcttctctatgattgttatagagacgagtctaaatgga
gtccaatctagaagtgtgtttggactttttaatgtgcctgctaagttgtatccatggata
ttattggtggtgttccagcttctcatgacaaacatttcattgcttggacacttatgtggg
attttatctggatttgcatacacttatggattattcaactttataataccggggagctct
ttctattcgggcatagaatcctcttcttggctttcaacttgtgtgcgtagaccaaaatat
ataatgtgcacaggtggggagccttctggatacatccctacatattccactcgtaataca
gcatccagtgaatcgctttctgggaatatgtggtcaaacttgtcttcatggatgccacgg
agagaggttccttcccagtcaacagaagaaagtagcaggttccctggccgtggaaggaca
cttggtgcaccccaaatggaaacagtatccaacaacagttctgactcgagcctacaggct
agactgttggaaacccctgtccgcccttcaactcaggaacctataggtgcaggacagcag
agaaatgatagaaggcagccagggatagataacacagcagctgcaactatgggctcccct
gtcagtcaggtcacagttgcatcagatgaagacattcaaaagcttctagcaatgggtttt
gataagacacaggtggaagttgccatagcagctgcagatggagatgtgaatgtagctgtt
gaaatactcatgagccaacaggtaagtatctga
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