Cynara cardunculus var. scolymus (artichoke): 112519238
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Entry
112519238 CDS
T05604
Name
(RefSeq) ras-related protein RABH1b
KO
K07893
Ras-related protein Rab-6A
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112519238
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112519238
04031 GTP-binding proteins [BR:
ccav04031
]
112519238
Membrane trafficking [BR:
ccav04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
112519238
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
112519238
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112519238
Exosomal proteins of bladder cancer cells
112519238
GTP-binding proteins [BR:
ccav04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
112519238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
SRPRB
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
FeoB_N
TIR_2
ATP_bind_1
AAA_7
Motif
Other DBs
NCBI-GeneID:
112519238
NCBI-ProteinID:
XP_024983022
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All DBs
Position
LG 10:18626583..18633346
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AA seq
209 aa
AA seq
DB search
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFMNTAKWIEEVRTERGSDVIIVLV
GNKTDLVDKRQVSIEEGEAKARDFNVMFIETSAKAGFNIKALFRKIASALPGMEALSSST
KQEDMVDVNLKSSNSSGSQQQPQSGGCSC
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtgtcggctctagcgaagtacaagctcgtgttcttaggagatcaatcagtt
ggaaaaacgagcatcatcactcgattcatgtatgataagtttgacaacacttatcaggct
accattggtattgattttttatcaaaaactatgtatcttgaggatcgaacagtacgcttg
cagctttgggatacagctggacaagaaaggttcaggagtctcattccaagttatatcagg
gattcctctgttgccgtcattgtttttgatgttgcaagccgacaatcatttatgaacacg
gcaaaatggattgaggaggtccgcactgagcgaggcagtgatgttataattgttcttgtt
ggaaataaaactgaccttgtggataagaggcaagtttctatagaggaaggggaagctaaa
gctcgtgattttaatgtaatgtttattgaaactagtgccaaggcgggcttcaatataaag
gctttgtttcgaaagatagcttcagcattaccaggaatggaagctttatcgtcttcaaca
aagcaggaagacatggtggatgtaaatctcaagtccagcaattcaagtggatcccagcag
caaccccagtctggaggatgctcatgctga
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