Cynara cardunculus var. scolymus (artichoke): 112519311
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Entry
112519311 CDS
T05604
Name
(RefSeq) DNA topoisomerase 2 isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccav03032
]
112519311
03036 Chromosome and associated proteins [BR:
ccav03036
]
112519311
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
112519311
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Topoisomerases
112519311
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
112519311
Centrosome formation proteins
Centriole proteins
112519311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
Tn7_TnsA-like_N
Motif
Other DBs
NCBI-GeneID:
112519311
NCBI-ProteinID:
XP_024983130
LinkDB
All DBs
Position
LG 10:complement(12260433..12267471)
Genome browser
AA seq
1502 aa
AA seq
DB search
MATEQRQPLQSSTTDNIPPTTKVASKRGRTIEETFQKKTQLEHILLRPDTYIGSIEKHEQ
TLWVWEGDQMVKRPISYVPGLYKIFDEILVNAADNKQRDPKMDSVKVTIDVDKNLISVYN
NGDGIPVEIHKEEQIYVPELIFGHLLTSSNYDDSIKKTTGGRNGYGAKLANIFSTEFTIE
TADGKRNRRYKQVFSNNMGNKSEPTITKCKSGENWTMVSFKPDLSKFGMECLEDDVVALM
KKRVVDLAGCLGKSVKVELDGKRVPPKTFEDYVKLYLPSSADTLRLYEKVNERWEICVSM
ADGHFEQVSFVNNIATIKGGTHVDYITNQIANHLVAVVKKQNKHATLKAHNVKNYLWVFV
NALIDNPAFDSQTKETLTIKQSSFGSTCELTPDFLKKVAKSDVVKRVVSWVQFKQQNDLK
KTDGNKRGKLNIPKLEEANYAATSNSDNCTLILTEGDSAKALAMSGLSVVGQDFYGVFPL
RGKLLNVREASPKQLQENAEIQNIKKILGLQQAKVYENVKSLRYGHLMIMADQDHDGSHI
KGLLINFLHTFWPSLLKVPNFVLEFITPIVKATNKRTKNVLSFYTMPEYEGWKENLGHRA
REYKIKYYKGLGTSNGKEGAEYFADLDKHKKDFVWADDEDGEAIELAFSKKKIEARKTWL
RALQAGTYFDSKEKHIPYRDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCAFKKP
IFQEVKVAQFSGYVSEHSAYHHGEQSLVSTIIGMAQNYVGSNNINLLYPSGQFGTRQMGG
KDHASGRYIYTKLSPITRHLFQKSDELLLDYLNEDGQSIEPTWFMPIIPMALVNGSEGIG
TGWSTFVPNYNPRDIIANLKRLLNNEPLVPMDPWYKWFKGTILKMTSKDTGYTTTGIVEE
KEDEPNKLIISELPIRKWTQEYKEFLEAASLSGKDKEPFIEEYMAHNDDTTVNFEVIMSA
EQMNNARQEGFLKKFKLTSNLNTSNMHLFDANGVIKKYDTPEQILEEFFHLRLKYYEKRK
ATLLHELRKALLQLENKVRFILEVMAGTIILNNRVIEDLYAELKDKGYTPLPKEAVLEAS
IAGAVDHVEGSEETDEATEEETSEVVIEEKYQATASKTIPGTEYDYLLSMELRTLTLKKK
NQLCAERDTKKAIFDELTGTPSRSLWLRDLDALEKQLDEQDKRDAKDEAERRRQQEKAAK
AGGGRNVRKPARKAVTKKATITAAVAEPMETSVSSAMETGNAPAVAKPRGRAAGSKKPPA
KNKAKPTLIDEDDDEEIPSLADRLGKHNIQSEQEDDVIVELEDQLARHNIESSPDQSEVV
VPNKKGPTKRGAAKKATITEISDDEDEMVMEDGSDFEVLSEAPVEKKKRGGGRKVVAATK
PPTGATKKRGPAAKKSQQTVPDGQRLITEALKPAASPEKKVRKMRPSPFNKKSGSMLGRL
SSSEEEMVAETSGEVAAPPPNARPQRVNRRKTTYVVSDSDESEEDKPSEDSEFDDDDDED
EE
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagagcaacgccagccactgcaatcaagcaccaccgataacatcccaccgacc
actaaagttgccagcaaaagaggtaggaccatcgaagaaacttttcagaagaagactcag
ctcgagcatattcttctccggccggatacttacatcggatccattgaaaagcatgaacaa
acactttgggtatgggaaggagatcaaatggtgaaaagaccaatatcgtacgtccctggt
ctctacaagatctttgatgagattcttgtgaatgccgctgacaacaagcagcgagatcct
aaaatggactctgtgaaggtcactattgatgtcgacaagaatttaatcagtgtgtataat
aatggagatggaatacccgtagaaattcacaaggaggaacagatctatgttcctgagttg
atttttgggcatttgctgactagtagtaattacgatgattctattaaaaaaactactggt
gggagaaatggttatggtgcgaagcttgccaacatcttctccaccgagtttacaatcgag
actgcagatgggaagcgtaacagaagatataagcaggtgttctcaaacaacatggggaat
aaatctgagccaaccataacaaagtgcaagtctggtgaaaattggaccatggtctcattt
aagcctgatttatccaaatttggcatggaatgccttgaagatgatgtagtcgctttgatg
aagaagcgggtagttgatttagcaggctgccttggaaagagtgtgaaagttgaactagat
ggaaaacgtgttcctcctaaaacattcgaagactatgtgaagctttatctcccatcatct
gccgacaccttaaggctatatgagaaagtaaatgaaagatgggagatatgtgttagtatg
gctgatggacattttgaacaggtcagctttgtgaacaatattgccacaatcaagggaggg
actcatgttgactacataaccaatcagattgccaatcacttggtagctgttgtaaagaaa
cagaacaaacatgctactctcaaagcccacaatgtaaagaattatctatgggtatttgtc
aatgcactcattgacaatcctgcttttgattcacaaacaaaggagactttgacgattaaa
caaagtagttttgggtcaacatgtgaactcacaccggacttcttaaagaaagtggccaaa
tctgatgtggtgaaaagagtcgtctcttgggtacagtttaaacagcagaatgacctcaag
aaaaccgatggtaacaagaggggaaagctcaacattcctaaacttgaagaggctaattat
gcggctacaagtaattccgataactgtaccttgatactgacggaaggagattcagccaaa
gctcttgcaatgtctggattatctgtcgtgggccaagatttctatggtgtgtttccattg
aggggtaaactgctgaatgtgagggaagcaagccctaaacagttacaggagaatgctgaa
attcagaacattaagaagattcttgggcttcagcaggctaaagtttacgaaaatgtgaag
tccttgagatatgggcatttgatgataatggctgatcaggatcatgatggttcacacatc
aaagggttgttgattaacttccttcacacattttggccgtctttactaaaagttccgaac
tttgtgcttgagttcatcacgccaattgttaaggctactaacaagaggactaagaatgtg
ttatcgttctatacaatgcccgagtatgagggttggaaggaaaatctggggcacagggca
agagaatacaaaataaagtactataaggggctgggaacaagtaatggtaaagaaggggcg
gaatactttgctgatcttgacaagcataagaaggattttgtttgggctgatgatgaggat
ggtgaggcaatagagctggcatttagtaagaagaaaattgaggccaggaagacctggctc
cgggcacttcaggccggtacttattttgattcgaaggagaaacatatcccatatcgtgac
ttcatcaacaaggagcttattctattttcaatggctgatcttcaaagatctataccatca
atggtagatggattgaaaccagggcagagaaagattttattctgtgccttcaagaagccc
attttccaggaagtaaaagttgctcaatttagtggctatgtatctgagcattctgcttat
catcatggggagcaaagtcttgtaagtacgatcattggcatggctcaaaattatgtgggc
agcaataatatcaaccttctttacccaagtgggcaatttggcacccgtcagatgggtggc
aaagatcatgcaagtggcagatatatctacactaagctttctcctatcactcgacatctt
tttcaaaagtcagatgaacttctcctagactacttgaatgaagatgggcaatccattgag
cctacctggttcatgcctataattccaatggctctggtgaatggaagtgaagggataggc
actgggtggagtacatttgtaccaaattacaatccaagggatatcatcgctaacctcaag
cgcctattgaacaatgaaccattggtgccaatggatccatggtataaatggttcaaggga
accattctgaaaatgacatcaaaggacactggatatacaactacaggaattgtagaggaa
aaagaggatgaaccaaataagcttattatctctgagctgccaataaggaaatggactcaa
gaatataaggaatttttggaggcagcttcattgtcagggaaggacaaggaaccattcatt
gaggaatatatggctcataatgatgatacgactgtaaattttgaagttatcatgtctgca
gaacaaatgaacaatgcaaggcaggaggggtttctgaaaaagtttaagctaacgagcaat
ttaaacacaagtaacatgcatctttttgatgcaaacggtgtaataaagaagtatgacacc
cctgaacaaatccttgaggagttctttcaccttcgtctcaaatattatgagaaaagaaag
gcaactctgcttcacgagcttcggaaggctttattgcagctggaaaacaaagtcaggttt
attcttgaggttatggcaggaacaatcattctgaacaacagagtgatagaagacctgtat
gccgagttgaaagataaaggctatacgcctttaccaaaggaagctgtgttagaagcatcg
attgcaggagcggttgatcatgttgaaggaagtgaggaaaccgatgaggctacagaggag
gaaacgtctgaggtggtgattgaggaaaaatatcaagctactgccagcaagacgattccc
ggaacagaatatgattacttgctgtctatggaacttcgaacccttacccttaagaagaaa
aatcagctatgtgctgaaagggatacgaaaaaagcaatatttgatgagctcacaggcact
ccttcgaggtctctatggttgcgagatcttgatgctcttgagaaacaacttgatgaacaa
gacaagagagatgcgaaagatgaagcagagagaaggagacaacaagaaaaggcagcgaag
gctggtggtggtaggaatgttaggaagcctgccagaaaggcagttaccaagaaggcaacc
atcacagcggcagttgctgaacccatggaaacttccgttagttctgcaatggaaacaggc
aatgctcctgctgtcgcaaaaccaagaggtcgagcagcaggttcaaagaaacctccggcc
aagaataaggcgaaacctactttgatagacgaagatgacgatgaggaaattccttcgctg
gcagatcgacttgggaaacataatatacaatctgagcaggaagatgatgtgattgttgaa
ttggaagatcaattagcaagacataatattgaatcctctcctgatcaatcagaagtagtt
gttccaaacaagaaaggaccaactaaaagaggtgctgcaaagaaggctaccatcactgag
atttctgatgatgaagatgaaatggtgatggaagatggttctgactttgaagtcctgagt
gaagcaccggtggagaaaaagaagcgtggtggaggccgaaaagtggtggcagcaaccaaa
cctccaactggagctaccaagaaaagaggaccagctgctaagaaatcccaacaaaccgtt
cctgatggacaaagactgattacagaagcgttaaagccagcagcatcaccggaaaagaag
gtgaggaagatgagaccttcaccgtttaacaagaaaagcgggtctatgttgggaaggttg
agtagtagtgaagaggagatggtggcagaaacaagcggtgaagtggcggcaccaccaccg
aatgctagaccccagagggtaaacagaaggaagacaacatatgtggtgagtgattctgat
gagagtgaggaagataaaccatctgaggattctgaatttgatgatgatgacgatgaagat
gaagagtaa
DBGET
integrated database retrieval system
