Cynara cardunculus var. scolymus (artichoke): 112519373
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Entry
112519373 CDS
T05604
Name
(RefSeq) Golgi SNAP receptor complex member 1-1-like
KO
K08495
golgi SNAP receptor complex member 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112519373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112519373
Membrane trafficking [BR:
ccav04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
112519373
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
AI-2E_transport
Motif
Other DBs
NCBI-GeneID:
112519373
NCBI-ProteinID:
XP_024983214
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All DBs
Position
LG 10:28228227..28232156
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AA seq
221 aa
AA seq
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MDPPTSWDSLRNQARKLEAQLDDQMHLYRKLVSIKVDDGSENDLASGIQQLLKQLHHVIS
QMQAWVSSGGSEIFSHTLTRHQEIHHDLSQEFNRLRSSLRAKREHASLLEDFREFDRTRL
DLEEGGASQEQSLLKERATLMRSTGQMDGVISQAQETLGTLMFQRSTFGGINSKLSNVSS
RLPTVNSILSSIKKKKSMDTIILSLVASICTFLILIYWLTK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggatccgccaacctcttgggactccttgcgaaaccaggcaaggaagcttgaagctcaa
ttggatgatcaaatgcatttgtatcgtaaattagtttcaattaaagttgatgatggtagc
gagaacgatcttgcatcagggatacaacaattactcaaacaactgcatcatgtaatttca
caaatgcaagcatgggtgtcatcgggaggatcagaaatattttctcacacattaactcgt
catcaagaaattcatcatgatcttagtcaggagttcaatcggcttcgatctagcctcaga
gcgaaaagagagcatgcatcactgctcgaggatttcagggagtttgaccgaacaagatta
gatcttgaagagggtggtgcgtctcaagagcagtctctccttaaggagcgtgctactctt
atgagaagtacggggcagatggacggtgtaatatcacaagcacaagaaactttaggtaca
cttatgtttcaacgttcaacatttggcggcatcaattcgaagcttagcaacgttagcagc
cgcctcccaaccgtgaatagcattttgtcatcgataaagaagaaaaaatctatggacacg
atcattctttcgttagttgcatctatttgcacgtttctaatcttgatttactggttgaca
aaatag
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