Cynara cardunculus var. scolymus (artichoke): 112519452
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Entry
112519452 CDS
T05604
Name
(RefSeq) syntaxin-61-like
KO
K08500
syntaxin of plants SYP6
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112519452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112519452
Membrane trafficking [BR:
ccav04131
]
SNARE
SNAP-25[C] (Qc)
STX6
112519452
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
DUF3394
Motif
Other DBs
NCBI-GeneID:
112519452
NCBI-ProteinID:
XP_024983342
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All DBs
Position
LG 10:complement(20608284..20614017)
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AA seq
246 aa
AA seq
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MSSIQDPYYIVKEDIQDLIDKLQFTFRQWENISANGEEHFHLTKELLENCDSIEWQVGEL
EKTISVVTRDPARFGINEVELEKRKRWTSIARTQVGNVKKVLCGKDVNGVSISRRNGAHR
ELMRMPNSQRLDGSQQYIAGENDDFSSSESDRQMLLIKQQDEELDEMTESVQRIGGVGLT
IREELLAQDRIIDELGTETDDTANHLDFVQKRVDTVMKKAGIKGQLMMILFLVLSLIVLF
VLVFCT
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatacaggatccatattacattgtaaaggaggatatccaagatttgattgat
aagttgcagttcacttttcgccaatgggaaaacatctctgccaacggtgaagagcacttt
catcttacaaaggaactccttgagaattgtgatagcattgagtggcaggtaggtgaatta
gagaagacaatttctgttgtgacaagagaccctgcacggtttggcatcaatgaagtggag
cttgaaaaacgaaagagatggaccagcattgcgcggactcaggtgggaaacgtgaagaaa
gtattgtgtggcaaagatgtgaatggcgtaagcatatcaaggaggaatggagcacacaga
gaactgatgagaatgccaaattctcaacggctggatggatcccagcagtacattgctgga
gagaatgatgatttcagctcttcagaatcagatagacaaatgcttctcatcaagcaacaa
gatgaagaactggatgagatgactgaaagcgttcaaaggataggaggcgttggccttacc
atccgtgaagaactcctagctcaggatcggattatagatgaattgggtacggaaacagat
gacacagcgaatcaccttgatttcgttcagaaaagggtggatactgtgatgaagaaggct
gggataaaggggcagttgatgatgatattgtttttggttctttcacttattgttttattt
gttttggttttctgtacctaa
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