Cynara cardunculus var. scolymus (artichoke): 112519638
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Entry
112519638 CDS
T05604
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112519638
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112519638
04147 Exosome [BR:
ccav04147
]
112519638
04090 CD molecules [BR:
ccav04090
]
112519638
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112519638
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112519638
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112519638
CD molecules [BR:
ccav04090
]
Proteins
112519638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_5
nSTAND1
AAA_30
AAA_15
AAA_25
APS_kinase
DUF87
Rad17
Motif
Other DBs
NCBI-GeneID:
112519638
NCBI-ProteinID:
XP_024983621
LinkDB
All DBs
Position
LG 10:complement(26533374..26539730)
Genome browser
AA seq
1330 aa
AA seq
DB search
MRSEEFQAKIKRGKEQWRWSEMQGLEVVSENPNPPLGSQHKPTQTRTQDMEMEGENSKNA
DKDNKGSSVGFGELFRFADRLDYVLMGIGTVGAFVHGCSLPIFLRFFADLVNSFGSNPND
TDKMTQEVLRYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALSQDIQFF
DTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVV
PLIAIIGAIHTTTLAKLSSKSQQALSEAGNIAEQTIAQIRTVFAYVGESRALQAYSAALK
ISQKLGYKTGFSKGLGLGATYFTVFCCYALLLWYGGYLVRHHYTNGGLAISTMFSVMIGG
LALGQSAPSMSAFAKAQVAAAKIFQIIDHKPTVDRNSESGLELDSVSGQVELKNVDFSYP
SRPDTKILNNFTLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLDGHDIKGLK
LRWLRQHIGLVSQEPALFATTIKENILLGRPDASMVEIEEAARVSNAHSFIIKLPDAYDT
QVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTT
LVIAHRLSTIQKADLVAVLQQGGVLEIGTHDDLIAKGENGVYAKLIKMQEVAHETAINNA
RKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSVDGGYPNYRLEKLPF
KEQASSFCRLAKMNSPEWTYALIGSVGSVICGSLSAFFAYVLSAVLSVYYNQDHAYMIQE
IGKYCYLLIGVSSAALIFNTLQHFFWDVVGENLTKRVREKMLDAVLKNEMAWFDQEENES
SRVAARLALDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALVLVAVFPLVVAA
TVLQKMFMQGFSGDLEGAHAKATQLAGEAVANMRTVAAFNSESKIVKLFTASLDVPLRRC
FWKGQIAGSGFGMAQFLLYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAET
LTLAPDFIKGGRAMKSVFDLLDRKTEIEPDELDAIPVPDRLRGEVELKHIDFSYPSRPDI
PVFRDICLRARAGKTLALVGPSGCGKSSVIALIQRFYEPSSGRVTIDGKDIRKYNLKSLR
RHIAVVPQEPCLFATTIYENIAYGHESATEAEITEAATLANAHKFISSLPDGYKTFVGER
GVQLSGGQKQRVAIARAFLRKAEIMLLDEATSALDAESEKCIQEALERVCSGKTTIIVAH
RLSTIRNAHSIAVIDDGKVAEQGSHSHLLKNYVDGCYAKMIQLQRFSHGHEAIKMVSTGS
SSSTTRDEQI
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcagaagagtttcaggcgaagataaagagaggcaaagagcagtggagatggtct
gaaatgcaaggtcttgaagttgtctctgaaaacccaaatccacccttgggttcacaacac
aaaccgactcaaaccagaacccaagatatggaaatggaaggagaaaatagtaaaaatgca
gataaagataacaaggggagttcagttggatttggagagctgtttagatttgcagataga
ttagattatgtgttaatggggattggtacagttggtgcctttgttcatggctgttctttg
cctatttttctcagattctttgctgatcttgtcaattcatttggctccaatccaaatgac
actgataaaatgactcaagaagtgttaaggtatgcattttactttcttgtagttggagct
gcaatatgggcatcttcatgggcagagatatcatgttggatgtggacaggagagaggcaa
tcaacaaaaatgaggattaaatacctagaagcagcactgagtcaagacattcagttcttt
gacacagaagtcagaacttcagatgttgtatttgctatcaatactgatgctgttatggtt
caagatgccattagtgaaaagttagggaattttatacactatatggcaacatttgtgtct
ggatttgtggtgggattcacggcggtttggcaactggcgctggtgacacttgcggtggtg
ccgctaatagctataatcggagctattcacaccaccacattagctaaactgtcttctaaa
agccaacaagccctttcagaagctggaaacatcgctgagcagacgattgcgcaaattcga
accgttttcgcctatgttggtgaatcaagggcactacaagcctactctgccgcactaaag
atctcacagaaacttggatacaaaactggattttcaaaaggattgggattaggagcaact
tatttcacagtcttttgttgctatgcacttcttctatggtatggaggctatcttgttaga
caccattacacgaacggaggactcgctatttccacgatgttctcagtcatgatcggtgga
cttgctttaggccaatctgctccaagtatgtctgcatttgcaaaagcacaagtagcagcg
gctaaaatctttcaaataatcgatcataaaccaaccgttgatagaaacagtgaatcgggg
ttggagttggattccgtttcaggtcaagtagaattaaaaaatgttgacttttcatacccg
tcaagaccagatactaaaattcttaacaatttcactttgagtgttcctgctggaaaaacc
attgctttggttggaagcagtggttctgggaagagcaccgttgtttccctcattgaaaga
ttctatgatcccacctcaggtcaagtaatgcttgatgggcatgacatcaagggactcaaa
ttgagatggttaaggcaacatattggtctggttagccaagagccagcactgtttgcaacc
accatcaaagaaaacatacttttgggtcggcccgacgcatccatggtcgagattgaagaa
gctgcacgtgtctcaaacgctcattcgttcatcatcaaattacccgacgcctacgatact
caggttggggagagaggattacagttatcaggaggacagaagcagagaatagcgatagcg
agagcaatgctaaagaatccggcgatcttgcttttggatgaggccacgagtgctttggat
tcggaatcagaaaagttggtacaagaggcgttagaccggttcatgatcggaaggactact
cttgtgatcgctcaccgcctctccaccatacaaaaggcggatctcgtggcggttttgcag
caaggtggtgttttggagatcggaactcatgatgatcttattgccaaaggcgaaaatggg
gtctacgctaagctcataaagatgcaagaagtagcccatgaaactgcaatcaacaatgcc
cgaaagagcagtgcacggccttctagtgcaagaaactcggtgagttcacctataattacc
cgaaactcgtcttatgggagatcgccgtactctcggaggttatctgatttctcgacctcg
gactttagcctatcggttgatggaggatacccgaactatcggctcgagaagcttccgttt
aaggagcaagcgagctccttctgtcggctcgcaaaaatgaactctcctgaatggacctac
gctttgataggctcggtgggttcggtcatttgcggttcactgagcgcgttttttgcttac
gttctcagcgctgtcctcagcgtgtactacaaccaagatcatgcatacatgattcaagaa
atcgggaaatactgttatctgttgatcggggtgtcttcggctgctcttattttcaacacg
ttgcagcattttttctgggatgtcgttggagaaaacttgacgaaaagggttcgagagaag
atgctggatgcggttttgaagaatgaaatggcatggttcgatcaggaggagaatgagagc
tcaagagtagcagccaggctggctctagatgcgaataatgttcggtccgcaattggggac
cgaatttccgtgatcatgcagaactccgccctcatgttggttgcctgcaccgccggtttt
gttcttcaatggcgcctcgccctggttctcgttgccgttttccctctggtggttgcagca
actgtattgcagaaaatgtttatgcaaggattttccggcgatttggaaggtgcacacgcc
aaagctacgcagctcgcaggggaggcagtggcgaatatgagaacggtggcagcgttcaat
tcggagtcgaaaatcgtaaagcttttcacagcaagtcttgatgtgccacttcgtagatgc
ttttggaagggacagatagcggggagtgggttcgggatggctcagttcttgctctatgct
tcgtatgcgcttggcctttggtacgcgtcgtggctcgtaaagcatggcatttccgatttc
tccaagaccattcgggtgttcatggttctcatggtctcagcaaatggtgcagccgagacc
ctaactcttgctcccgatttcatcaagggcggccgagcaatgaagtcggtgttcgatctt
cttgaccggaaaaccgagatcgagcccgatgagctcgacgcgattcctgtccctgaccgt
ctccgcggtgaagtggaactcaagcacatcgacttttcttacccgtctcgtcctgacatc
ccggttttccgtgacatctgtctacgagctcgagccggaaagactcttgccctggtgggc
ccaagcggttgcgggaaaagctcggtgatcgcactgatacaaagattctatgagccatca
tccggacgtgtgaccatcgatggaaaagatatccggaaatacaacctaaagtcactacgc
cgccacatcgccgtggtcccacaagaaccgtgcctcttcgccaccacaatctatgaaaac
atcgcgtacggacacgagtcggcaaccgaggccgagatcacggaagccgccaccctcgca
aacgctcacaagttcatatcctcattaccagacggatacaaaacgttcgtaggggaaaga
ggcgtgcagctctccggagggcaaaaacaacgtgtggccatcgcaagggcgtttttgaga
aaagccgagatcatgttgctagacgaggctacgagtgcactagacgcagagtccgaaaag
tgcattcaagaggctctcgagcgtgtttgctcaggaaaaacaacgataatcgtagcacat
cgactatcgacgatacgcaatgcacacagcatcgcggtcatcgatgatgggaaagtggca
gaacaaggatcacactcgcatctactgaaaaactacgtagacggatgttacgcgaagatg
attcagttacagagattttcacacgggcacgaggccataaagatggtatcaaccggttcg
agttcatcaactacgagagacgaacaaatatga
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integrated database retrieval system
