Cynara cardunculus var. scolymus (artichoke): 112519674
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Entry
112519674 CDS
T05604
Name
(RefSeq) tubulin alpha-3 chain-like
KO
K07374
tubulin alpha
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04145
Phagosome
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112519674
09142 Cell motility
04814 Motor proteins
112519674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112519674
03036 Chromosome and associated proteins [BR:
ccav03036
]
112519674
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112519674
04147 Exosome [BR:
ccav04147
]
112519674
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112519674
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112519674
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112519674
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112519674
Exosomal proteins of other body fluids (saliva and urine)
112519674
Exosomal proteins of colorectal cancer cells
112519674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF7281
Motif
Other DBs
NCBI-GeneID:
112519674
NCBI-ProteinID:
XP_024983658
LinkDB
All DBs
Position
LG 10:22626955..22631022
Genome browser
AA seq
449 aa
AA seq
DB search
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTPGVADDAFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLAFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHALLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISVEKAYHEQLSVPEITNAVFEPAS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGVEDEGEDEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatcataagcatacacataggtcaagctgggattcaagtgggaaattcatgt
tgggagctttactgccttgaacatggcattcagcccgatggcatgatgcctagtgacacc
acgccaggtgttgcagatgatgcattcaatacgttctttagcgaaactggtgccggaaag
catgtgccaagagcgatatttgttgatcttgaaccaactgtcattgatgaagtcaggaca
gggacttatcgtcaactcttccaccctgagcagcttatttctggaaaggaagatgctgct
aataactttgccaggggccattacacagtggggaaggagattgttgatctatgccttgat
cgagtaaggaagttagcagataactgcactggcttgcaagggtttttggcgttcaatgct
gttggtggaggtaccggttctggccttgggtccttgttgttggaacgcttgtctgttgac
tatggaaagaagtcaaagctcgggttcaccatctatccttctcctcaggtctcaacagca
gttgtggaaccatacaacagtgttctttctactcatgctctacttgaacatacggatgtg
gcagtgctcttggataatgaagcaatttatgatatctgccggagatcattagacatcgag
aggcctacatataccaacttgaaccgactgatttctcagatcatatcatctttgacgact
tccctccgtttcgatggagccattaatgttgatattacagagttccaaacaaaccttgtg
ccataccctcgtatccatttcatgctttcttcgtatgcacctgtaatatcagtcgagaaa
gcataccatgagcagctctcggtacctgaaatcacaaatgcagtgttcgagcctgcaagc
atgatggctaaatgtgatcctaggcatggaaagtatatggcctgttgcttgatgtatcgt
ggagatgttgtccctaaagatgtcaatgctgctgttgccacaatcaagactaagcgcacc
gtgcaatttgttgattggtgcccgactggtttcaaatgtgggatcaattatcagccacca
acagtggtaccagggggagatcttgcgaaggtgcaacgagcggtttgcatgatcagcaac
aatacagcagttgctgaggtgttttcaaggatcgaccataagtttgatctgatgtatgca
aagagggcattcgttcattggtacgtgggtgaaggcatggaggaaggtgagttctcggaa
gcccgtgaagaccttgcggctctcgagaaagattacgaagaagttggtgccgaaggagtg
gaggatgaaggcgaagacgaggagtactga
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