Cynara cardunculus var. scolymus (artichoke): 112519678
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Entry
112519678 CDS
T05604
Name
(RefSeq) probable UDP-arabinose 4-epimerase 3
KO
K12448
UDP-arabinose 4-epimerase [EC:
5.1.3.5
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
ccav01250
Biosynthesis of nucleotide sugars
Module
ccav_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112519678
Enzymes [BR:
ccav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.5 UDP-arabinose 4-epimerase
112519678
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-GeneID:
112519678
NCBI-ProteinID:
XP_024983663
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Position
LG 10:complement(8357652..8363231)
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AA seq
416 aa
AA seq
DB search
MLNFSRSRAQPRPNRSHPLGGMDYADPKKKSGVVGKILLAAGLTALCILMLKQSPSFNTP
TAFSRHEVGITHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNIGAVKVLQDLFPE
PGRLQFIYADLGDSKSVHKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVL
EAMAAHNVNTLIYSSTCATYGEPEKMPITEETPQIPINPYGKAKKMAEDIILDFHKNSDM
AVMILRYFNVIGSDPEGRLGEAPRAELREHGRISGACFDAAHGITNGLKVRGTDYKTPDG
TCIRDYIDVTDLVDAHVKALDKAKPGHVGIYNVGTGKGRSVKEFVEACKKATGAPIKVDF
LPRRPGDYAEVFSDRSKILRELNWSAQYTDLEKSLRVAWRWQKSHPNGYGSSTASI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctgaactttagcagatcaagagctcaacccaggccaaatcgatcccatcctttggga
ggcatggattatgctgacccaaagaagaagagtggtgttgtaggaaagattcttttggct
gcaggccttactgcattatgcattcttatgctcaaacaatccccatctttcaacacccct
actgcattctctcgtcatgaagtgggcattactcatgtcttagtaacgggaggtgctggc
tatatcggttctcatgcggcactacgccttctaaaagactcctaccgtgtgactatagtg
gataatctttcccgtggaaacataggtgctgtcaaagttcttcaagacctgttcccagaa
cctgggagacttcaatttatatatgccgatttgggagattcgaaatccgttcacaaaata
ttttctgaaaatgcgtttgatgcagtgatgcattttgctgcagtcgcatacgttggggag
agtaccctttatcccctaaagtattatcacaatatcacatcaaatacgcttggcgtattg
gaggccatggcggcacacaatgtcaatacacttatatattctagtacatgtgcaacatat
ggagaacccgagaagatgcccattacagaagaaactcctcagattccgatcaatccttat
ggaaaagctaagaagatggcagaagatattatcctggattttcataaaaactcagacatg
gcggtcatgattctaagatacttcaacgtgattggttccgatccagagggaaggttaggg
gaagcaccaagggccgaactacgtgaacatggaagaatatcaggtgcatgctttgatgca
gcccatggaatcacaaatgggctcaaggttcgaggaacggactataaaaccccagatggg
acttgcatacgggactacattgacgtcactgatctagtcgatgctcatgttaaagccctt
gacaaagcaaaacccgggcatgttggaatctacaacgttggtacaggaaaaggtagatcg
gttaaagaatttgtggaagcttgtaaaaaggcaaccggtgcacccatcaaagtagacttt
ctcccgcgccggcccggtgactatgccgaagtgttcagtgaccgatccaagattctccgt
gagctcaactggtctgcacaatacaccgatcttgagaagagtttgcgggtggcatggaga
tggcaaaagtcgcatcctaacggctacggttcctcaacggcttccatctga
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