Cynara cardunculus var. scolymus (artichoke): 112519737
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Entry
112519737 CDS
T05604
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-7-like
KO
K10357
myosin V
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112519737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112519737
04131 Membrane trafficking [BR:
ccav04131
]
112519737
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112519737
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112519737
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112519737
mRNA cycle factors
P-body specific factors
112519737
Membrane trafficking [BR:
ccav04131
]
Others
Actin-binding proteins
Myosins
112519737
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112519737
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112519737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
112519737
NCBI-ProteinID:
XP_024983750
LinkDB
All DBs
Position
LG 10:21167936..21202997
Genome browser
AA seq
1631 aa
AA seq
DB search
MQATSENIIVGSQVWVEDPEVAWIDGDVLVINDKEIKVKCSSGKEVVTNVSRVYPKDPEF
PECGVDDMTKLAYLHEPGVLQNLKCRFDINEIYTYTGNILIAVNPFKRIPNIYNKEVMDR
YKGVDLGDLSPHPYAIADSAYRQMVHERISQSILVSGESGAGKTESTKNLMQYLAYMGGR
AGGDERSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFNEQGKISGAAIKTYLL
ERSRVCQVSDPERSYHCFYMLCAAPPEVSEKYKLGNPGTFHYLNQSNCYELTGVDESKEY
LATKQAMEVVGINSDEQEAIFRVVAAILHIGNIGFSRGSEPDSSQPKDDKSRFHLKTAAE
LFMCDEIALQDSFCKRVIVTRGESIRKTLDPNSAALNRDALAKIVYTRLFDWLVSKINSS
IGQDANSKFLIGLLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEI
DWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHSTFAEKLYQMFKDHKCFNKPK
LSKTDFTICHYAGDVTYQTDLFLDKNKDYVVAEHQELLTASKCSFVASLFPPLPQDSSKA
SKFSSIGSKFKQQLQALLETLSHTEPHYVRCVKPNNLLKPGIFENQNILQQLRCGGVMEA
IRISCAGFPTRKPFAEFIERFKVLSPEVTKLSDEVQASRILLEKANLKGYQIGKTKVFLR
AGQMAEIDARRSEVLGRSAVVIQAKFLGYSGFKKFTLLRSSVVPIQAACRGEVARSRYER
RRREVACMKIQKHTRMHCKRKSYKRLCSLAIELQKIIRGMAARKALYCRKQVRAAVFIQS
RCRQFLASLHYLRVRHAAIIAQSIFRGDWARRELMKLKKAAKDTSALQHAKAQLEREIKE
AAMRLQEEERMRADTEEAKNKEIATLQSALKEMEVQLADMEEAKNKESAKLQAALKELED
QLADMEEAKNKEASDLQSALKEMEVQLADMGEAKNKETSSLQSALKEMEVQLADMEEAKK
KETSDLQSALKEMEARMADMEEAKDKENAKLQSALKEMEVQLVLCNFPKTSSISXYSKHE
IRVYRKKDFNFNLFLLFICIQILXADMEDTKNKEITQLQSSLKEMEGQFQETKELLEAAQ
KEMEQLRATDNEKIENLTTDNEKLKEKVNLLEQELDETQKKYEETSKLSEDRLIQALDAE
SKIIDLKLDMQSLQEKISDMEAEDQILRQKERQSGTPSKKFDSNLTQSTIGRERDLVEAL
RKVATEDVGFCQGKPVATYVIYKSLLHWKTFEADITTVFDRIIQMMGSAIEKKEDVKHMS
YWLCVTSTLMFLIQRTLSPSPPKPQQPASLFGRMTQGFRSSSNAGIVKHIEAKYPALLFK
KQLAAYVDKIYGFIRNNLKKDLSQLLSSCIQAPTISDGNPYPTFYWEHIIERLNELLDTL
KEYHVPSVIIRKMFAQVYTYIDVQLFNSLLLHKECCSITYGEYVKAGLAKLEQWCSQVTA
EYADSSSDELTHVRQAVEFLVIQQKSTISYDHLTTTLCPVLSVQQHYQICTLYSNGNDDT
NGVPPEVISKLKVLMTEDSGNPDSDSYLLDDNSGISFPVDEINKSLNEKDFAEIKLTPEI
ADNPGLQFLLE
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctacttcagaaaatatcatagttggatctcaagtctgggtggaggatcctgag
gtagcttggatagatggtgatgttttggtaataaatgacaaagaaataaaagtaaaatgt
tcatcaggaaaagaagttgttactaatgtatcccgtgtatatccaaaagatcccgagttc
cccgaatgtggagtggatgatatgacaaagttggcttatctgcatgagcccggggttcta
caaaatttgaaatgtcgatttgacattaatgaaatttatacttacacaggaaatattttg
attgcggtgaaccctttcaaacgaatacccaatatatataacaaagaagtgatggatcga
tacaaaggagtagatcttggggatctgagtccgcatccttatgctattgcagattcggca
tacaggcagatggttcatgagagaataagccagtcaattctggtgagcggagaaagtgga
gctggtaagacagaaagcacaaaaaatcttatgcagtatcttgcctatatgggaggtcgc
gctggaggtgacgagcggagtgtggagcagaaagtcctagaatctaatccggttttagaa
gcatttggtaatgcaaagactgtcaggaacaacaattcaagtcgtttcggtaagtttgtt
gagatccaattcaacgaacagggaaagatctctggagctgctataaaaacttatttgctg
gaaagatcacgtgtttgtcaagtttctgatcctgagagaagttatcattgcttttacatg
ctctgtgctgcaccacctgaggtctctgaaaagtataaattggggaacccagggacgttt
cattaccttaatcaatcgaactgttatgaactgacgggagtggatgagtctaaggagtac
cttgcaacaaaacaggccatggaggttgttggtatcaattctgatgagcaggaagctata
ttccgtgttgtggctgcaattctccacatagggaatattggtttcagtagagggagcgaa
ccagattcctctcaacctaaggatgataaatctcggtttcatctgaaaacagcagctgag
cttttcatgtgcgatgagatagctctccaagattctttctgcaagcgtgtgattgtaact
cgtggcgagagcatcagaaaaaccctagatccaaattctgcagcgctcaatagagatgct
ttggccaaaatagtttatacaagattatttgattggcttgtgagcaagattaatagctct
attggtcaagatgcaaactcaaaattcttgattgggcttctggatatttatggattcgag
agtttcaagacgaacagttttgagcaattttgcatcaatctgactaatgaaaaactccaa
caacattttaatcagcatgttttcaagatggagcaagaagagtataccaaagaggaaatc
gattggagttacatagagtttgtggacaatcaagacattctagatctcattgaaaagaaa
cctgggggaatcattgctcttttggatgaagcttgcatgtttccaagatccacgcacagc
acctttgctgaaaagctttaccagatgttcaaagaccataaatgttttaacaagccaaag
ctatcaaagacagacttcaccatttgccattatgctggtgatgttacatatcaaaccgac
ttgttcttggataagaacaaggactatgttgttgcggagcatcaggaactcttgactgct
tcaaagtgttcctttgtagcaagcttatttccacctcttccacaagattcatccaaagct
tcaaagttttcatcaataggttccaagttcaagcaacaattacaagctttacttgagaca
cttagtcacacagagccacattatgtccgttgcgtcaaaccaaataatcttttaaagcct
ggtatatttgagaatcagaatattttgcaacaacttcgatgtgggggagtcatggaggca
atcaggatcagctgtgccggctttcctactcgtaaaccttttgccgaatttatagaacgt
ttcaaagtcctttcaccggaagtcacaaaattaagtgatgaggtgcaggcttcaaggatt
ctattagagaaggcgaaccttaaaggttatcagattggtaaaacaaaagtgtttctgaga
gcaggtcagatggcagaaatagatgctcgcagaagcgaggttttaggaagatctgctgtt
gttatccaggcaaaatttcttggatattctggattcaagaagtttaccttgttacgaagc
tcagtagtaccaatacaagctgcatgtagaggggaagttgcacgttctcgctatgagcgt
cgaagaagagaagtggcatgcatgaagatccagaaacatacacgcatgcattgtaagagg
aaatcgtacaaacgcttgtgttctttggctattgaacttcaaaaaataatacgtggcatg
gctgcacgcaaagcactttactgtagaaagcaagtaagagcagcagtttttatccagagc
cgatgccgacaatttttagcttcccttcattatttgagggtgaggcatgcggcaattatt
gctcagtcaatctttagaggagactgggcacgcagagaactaatgaagcttaaaaaggct
gcaaaggataccagtgctctccaacatgccaaagctcaattggaaagggaaatcaaagaa
gcagccatgcgtttgcaagaggaggaacgcatgagggctgatacagaggaagctaagaat
aaggaaattgctacattgcagtctgctttaaaggagatggaagttcaattggctgatatg
gaggaagctaaaaataaagaaagtgcaaaactgcaggctgcattgaaggagttggaagat
caattggctgatatggaggaagctaaaaataaggaagcttcagacctgcagtctgcttta
aaggagatggaagttcaattggctgatatgggggaagctaaaaacaaggaaacttcaagc
ctgcagtctgctttaaaggagatggaagttcaattggctgatatggaggaagctaagaaa
aaggaaacctcagatctgcagtctgctttaaaggagatggaagctcgcatggctgatatg
gaggaagctaaagataaggaaaatgcaaaattgcagtctgctttaaaggagatggaagtc
caattggtgctctgtaactttccaaaaactagttccatttcttgatattcaaaacatgaa
ataagagtatacagaaagaaagactttaattttaacctttttttgttatttatttgcatt
caaattttgtaggctgatatggaggacactaaaaataaggaaattacacaactgcaatct
tctttaaaagagatggaaggtcaattccaagaaactaaagagctgctggaggctgcacag
aaagaaatggagcaacttcgtgctactgacaatgagaaaatagaaaatcttactactgat
aatgaaaaactcaaggagaaggttaatttattggaacaggaacttgatgaaacacagaag
aaatatgaagagaccagcaaactgagtgaagataggttgattcaggctttggatgcagaa
tcaaagataattgatttgaaacttgatatgcaaagtcttcaagaaaagatttctgacatg
gaagctgaggaccagattctgagacaaaaggaacgacagagtggcacaccttcaaagaaa
tttgatagcaacttgacgcaatccactataggaagggagcgtgacttggttgaggctctt
aggaaagttgctactgaagatgttgggttttgtcaagggaaaccagttgctacgtatgtc
atttacaaaagccttttgcactggaaaacttttgaagcagatataactaccgtatttgac
cgtataatccagatgatgggttctgcaatagagaaaaaagaagacgttaagcatatgtct
tattggctctgcgtcacatctacattgatgtttttgattcagaggactttaagtccaagt
cctccgaaaccccagcagcctgcatcgttatttggaaggatgacccaaggatttcgatca
tcttccaatgctggcatagtgaaacatattgaggccaagtacccagctttgctttttaag
aaacaacttgctgcttatgttgacaaaatatatggatttattcgtaacaacctgaagaag
gatttatcacaacttctctcctcatgtatccaggcaccgacgatatcagatggtaaccct
tatccaactttttactgggagcacatcattgaacgcctaaatgaactgcttgatacatta
aaagaataccatgtgccatctgtcattatccggaagatgtttgctcaagtttacacctat
atcgatgtacaacttttcaacagccttcttctacacaaagagtgttgttcgatcacatat
ggggagtatgtgaaagcaggattagcaaaattagagcaatggtgttctcaggtcacggca
gagtatgcagactcatcatcagatgaacttacgcatgtaagacaggcagtcgaatttctg
gttatacaacagaagtctacaatttcatatgatcatctcacaactactctatgtcctgtt
ctaagtgttcaacaacattaccaaatctgcactctctattcgaatggcaatgacgacacc
aatggtgtccccccagaagttatttccaagttaaaagttctaatgacagaggactctggc
aaccctgatagtgactcctatttgttggatgacaattcaggcatttccttcccagttgat
gaaattaataagtcgctcaacgagaaagattttgcagaaataaaacttacccctgaaatc
gctgataacccagggctccaatttttactggagtaa
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integrated database retrieval system
