Cynara cardunculus var. scolymus (artichoke): 112519780
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Entry
112519780 CDS
T05604
Name
(RefSeq) protein indeterminate-domain 9-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112519780
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112519780
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-BED
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
112519780
NCBI-ProteinID:
XP_024983804
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Position
LG 10:23267655..23270275
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AA seq
473 aa
AA seq
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MMSGDGFSSPPSSLTSFIHDPIPNPNPNPNSSASGKRKRNQAGNPDPDAEVIALSPTSLM
ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKNEVIKKKVYICPEKSCVHHDPS
RALGDLTGVKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRK
DSFITHRAFCDALMEENSRMTSLPVVPNMTNLSFRSDLMMMNAGGGGGGGGGNGGGDTQF
QGMFPGGLEGNLDVNGAKPRLPIWLDHNANNPHLENPNNSTFLGSSSSNYSNSGMLPSEM
VNWLSRYNGLPQGLSLKEEEENQKEMQMNSMYNYGGSTTQNNLLCSTLPPPPVANMSATA
LLQKAAQMGSTRSTNAGVSGGNDTGFGLMSTTLSSLSSPARNGDRLMMMTAAADGSTPNK
VAGGNEFGDGDLTRDFLGGARNERSHVSFNLQQELSKFASSTMGFSQFNRNRE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggtgatgggttctcatcgccaccttcttccctcacctccttcatccacgac
cccatcccaaaccctaaccctaaccctaattcatcagcttcaggtaaacgaaaacgtaac
caggccggtaatccagatccagatgctgaggtgatagcgttatcaccaacttctctaatg
gctacaaaccgattcgtctgcgagatatgtaataagggttttcaaagagaccaaaatttg
cagcttcatagaagaggacacaacttgccatggaagcttaagcaaagaaacaaaaacgaa
gtgataaagaagaaagtgtacatatgcccagagaagagctgtgttcatcatgacccttct
cgagctctcggagatctcaccggagttaagaagcatttcagtcgaaaacacggcgaaaag
aaatggaagtgcgaaaagtgttcgaagaagtacgcagtccagtcagattggaaagctcat
agcaagatttgcggtaccagagagtacaaatgtgattgtggaacgcttttttccaggaag
gatagcttcataacacatagagcattttgtgatgctttaatggaagaaaattcaagaatg
acatcacttccggtggttccaaacatgacgaatctgagttttcggagcgatttgatgatg
atgaatgccggtggcggtggcggtggcggtggtggtaacggtggtggtgatacacagttt
caaggtatgtttcctggaggtctagaaggtaatctagatgtcaatggagcaaaaccaaga
ttgccaatttggttagaccacaatgccaacaatccccatcttgaaaaccctaacaattca
acttttttggggtcgtcgagctcgaactacagcaatagcggaatgctaccatcggaaatg
gtgaattggttgagtagatataatggattaccacaagggttatctttaaaggaggaagaa
gagaaccaaaaagaaatgcagatgaactctatgtataattatggcggttccaccactcaa
aacaacctcctgtgttcaactctgccaccgccaccggtggctaacatgtccgccaccgct
ctcctacagaaggcagctcaaatggggtcaacaagaagcacaaatgccggagtttccggt
ggaaacgataccggatttgggctcatgagtacaactctctccagcttatcaagccccgct
agaaacggcgacagactgatgatgatgacggcagcggccgacggatcgacaccaaacaaa
gtagccggcggcaatgagttcggcgacggcgatttaaccagggattttctcggcggtgcc
agaaacgagcggagtcatgtatcgtttaatttacaacaagagctaagcaagttcgcttct
tccacgatgggattcagccaattcaatcgaaatcgtgaataa
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