Cynara cardunculus var. scolymus (artichoke): 112519842
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Entry
112519842 CDS
T05604
Name
(RefSeq) tRNA dimethylallyltransferase 2 isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00908
Zeatin biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00908 Zeatin biosynthesis
112519842
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccav01006
]
112519842
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112519842
Enzymes [BR:
ccav01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
112519842
Prenyltransferases [BR:
ccav01006
]
Compound prenylation
tRNA dimethylallyltransferase
112519842
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
112519842
Prokaryotic type
112519842
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
AAA_33
Zeta_toxin
zf-AD
AAA_16
AAA_22
zf-C2H2_jaz
DUF4795
AAA_25
SF3a60_Prp9_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
112519842
NCBI-ProteinID:
XP_024983910
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All DBs
Position
LG 10:complement(24815725..24823328)
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AA seq
478 aa
AA seq
DB search
MEMEGDSLRNPNGVPNQKGESRIANSKPKLVVIMGATGSGKSRLAIDLASLFPIEIINAD
SMQVYEGLDVLTNKVPLHDQRGVPHHLLGTISPMVEFTAKDFRDYAIPLINDITSRNHLP
VIVGGTNYYIQALVSHFLLDDSLEDTDESCLGETYGDKQQHIAVMPEQGNFSYSYDSLKD
LDPVAANRIHPNDHRKIRQYLRLYACSGVLPSKYLQEQTMENWGNADSLRYNCCFICVDA
SLTVIDKYVEQRVDQMVDSGLLQEVYDIFNPDADYTRGLRQAIGVREFEHFLKAYLSVGQ
SGTENGIIDQVSAVKYVEKLKENMNTVLSTAGEDPLKQLLQDAIDKVKLNTKRLVRRQKR
RLVRLQTLFGWKIHYVDATKCLSCLSEESWTVNVVEPSIQIIKSYFDKSTHLVPDFEASN
DTKGSKLIDRDLWTQHICKACGNKVLRGAYEWEQHKQGRSHRKRVCRLRKSGVSGLDD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagggtgacagtctcagaaaccctaatggagttccgaaccagaaaggagaa
agtagaattgcgaattccaagccaaaactagtcgtgataatgggagcaactggttcgggg
aaatctcgtctcgccattgacctagcttcactatttcctattgaaatcattaacgccgat
tccatgcaggtgtatgaaggattagatgttctcaccaacaaagttccacttcacgatcag
agaggagtgccgcaccatctcttgggtacgatcagccctatggtcgagttcactgcaaag
gattttagggattatgcgattccccttatcaatgatataacatccaggaaccacttgcca
gtcattgttggaggcacaaattattatattcaggcacttgtcagtcattttcttttggat
gactcacttgaagatacagatgaaagctgcttaggtgaaacttatggagataaacaacaa
catattgcagttatgccagagcaaggaaattttagctatagttatgatagtctgaaggat
cttgatccagttgcagcaaatagaattcatccaaatgaccatagaaagatacgtcaatac
cttcgtttatatgcttgctctggtgttcttcctagcaaatatcttcaggagcagaccatg
gagaactggggcaatgctgatagtttgagatacaactgttgttttatatgcgtggatgct
tctctcactgttatagacaaatatgtggagcagagggtagatcagatggtcgattcaggt
ttgcttcaggaagtttatgatattttcaaccccgatgcggattacactcgaggtttacgg
caagccattggtgtcagggagtttgagcatttcttaaaagcttatctctccgtaggtcaa
agtggcacagaaaatggtatcattgaccaagtgtcagcagttaaatatgttgaaaagtta
aaagaaaacatgaatacagttttgagtactgccggtgaggacccactgaaacagcttctt
caagatgccattgacaaagtgaagttgaataccaaaagacttgttcgtcgtcagaaaaga
aggcttgttcggctgcaaacattgtttgggtggaagatacattatgttgatgcaacaaaa
tgtctttcatgtttatcggaagagtcatggactgtaaatgtggttgaaccttcaatccaa
attatcaaatcttattttgataagagcacacatttggtgcctgatttcgaggcaagcaat
gataccaaaggatcaaaattgatagatcgggatttgtggacacaacacatatgcaaggca
tgtgggaataaggtgcttagaggggcatacgaatgggaacaacataaacaaggccggagt
catcgcaaaagagtttgccggcttaggaagtccggagtctctggcttggatgactaa
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