Cynara cardunculus var. scolymus (artichoke): 112519989
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Entry
112519989 CDS
T05604
Name
(RefSeq) protein NRT1/ PTR FAMILY 5.4-like
KO
K26562
MFS transporter, POT/PTR family, peptide/nitrate/nicotianamine transporter
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112519989
Transporters [BR:
ccav02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
112519989
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Gene cluster
GFIT
Motif
Pfam:
PTR2
MFS_1
Motif
Other DBs
NCBI-GeneID:
112519989
NCBI-ProteinID:
XP_024984063
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Position
LG 10:11665404..11670107
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AA seq
472 aa
AA seq
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MQYAENLDGDVHGALSGKEDFKVRGLLLLVVSVEKIPLKHRILPFFLALYIINIGEGGHR
PCIQTFAADQFDDNLAAEKLAKSSFFNWWYLGIVIGATTSILVVIYVQDNIGWGWGFGIP
AIVVAVALLVFLVGKSTYRKEVRVGSPLTKVAQVMVAAVRKRRLSEDNDGFEMCVEVGEG
GGTATRSLDRTNQFRFLDKAAMVDEIDRSTGKTNDWRLCTVNEVEQVKLLLRLVPIWLSC
LMFGVVIAQLGTFYTKQASTMIRTIGSHFQIPPASLQVIPGLTILTAVPLYERLFIPTAR
RFTNHPTGITVLQRIGFGIFFSILTMMVSALVESRRLRIASMDDPKSIVPMSVWWLVPQY
VLMGISDMLTIVGLQELFYDQVPDEMRSMGAATYLSVQGVGSFMSSAIISIIQKITAKHG
DEWLKGDNLNTAHLDYFYRVLACLSTVNLVVYVVLAKGFVYKKLQRNNVNGS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgcagagaatctggatggtgatgtgcatggtgctttgtcaggaaaagaagac
ttcaaagttcgaggattgttacttttggtggtatctgtggagaaaatcccattgaagcat
cggatactacccttttttttggccctttacatcatcaacatcggagaaggtggtcaccgt
ccatgtatccagaccttcgccgccgatcagtttgacgacaatctcgccgctgagaaactc
gccaagagttcatttttcaactggtggtacctggggattgtgattggtgccaccacttcc
attctagttgtcatttacgtccaagataatattggatggggttggggttttggcataccg
gcgatagtggtggcggtggcgcttctggtgtttttagttggaaaaagtacgtatcgcaag
gaggttcgagtggggagcccacttaccaaggtggctcaagtgatggtggcggcagttagg
aagcggcggttgtcggaggataacgacggtttcgaaatgtgtgttgaggtaggggaaggt
gggggtactgcaactcgatccttggatcgtaccaaccaattcaggtttttggacaaggca
gcaatggtggacgaaatagacagatcgacgggtaaaaccaatgattggcgactttgcacc
gtgaacgaggtggagcaggtgaagctcctcctccgcctcgtccctatttggttatcttgc
ttgatgttcggagtcgtcatagcccaactcggcaccttctacaccaaacaagccagcacc
atgattcgcaccattggctcgcatttccaaatcccccctgcatctcttcaagtcatccct
ggcctaaccatcctaaccgcagtcccactctacgagcgcctcttcatccccactgcgaga
cgctttaccaaccatccaaccggaatcacagtcctccaacgaatcgggtttgggattttc
ttctcaatcttgaccatgatggtatcagctctagtcgaatcccggaggctcagaattgca
tcaatggacgatccaaaatcgattgttccaatgagcgtttggtggctagtgccgcaatac
gttctgatggggatctctgatatgcttacgattgttggattacaggagttgttctatgat
caagtgccagatgagatgcgaagtatgggggcagccacatatttgagcgttcagggtgtc
ggaagcttcatgagcagtgctataatatccatcatccaaaagatcactgcgaaacacggc
gacgaatggttgaagggggataatctcaacacggcacacctcgactacttttatcgggtg
ttggcatgtttgagcaccgtaaatttggttgtgtatgtggttttggctaagggttttgtg
tataagaagcttcaaaggaacaacgtcaatggctcgtaa
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