Cynara cardunculus var. scolymus (artichoke): 112520241
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Entry
112520241 CDS
T05604
Name
(RefSeq) two-component response regulator ARR2-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112520241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112520241
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
112520241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
112520241
NCBI-ProteinID:
XP_024984307
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All DBs
Position
LG 10:complement(28127036..28131538)
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AA seq
687 aa
AA seq
DB search
MNLGGGQVVNKQSVMPSSSGASWKSTAAGGSGGGGGGDGGVPDQFPAGLRVLVVDDDPTC
LMILEKMLRNCNYEVTKCNRAEVALSFLRENKNGFDVVISDVHMPDMDGFKLLEHIGIEM
DLPVIMMSADDSKSVVMKGVTHGACDYLIKPVRIEALRNIWQHVVRKRKHEWKDFEPSAS
ADEQKPPEEPDYSSSANEGHNWKNTKRRKDEDDEGEDRDDSSSLKKPRVVWSVELHQQFV
AAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGSQHPGGMNASFMGG
PDAGYGSISSLNGLDLQALAASGQLGQLPPQSLATLQAAALGRSTNSKSPISAPVIDQRN
IFSFENPKSRYTEVQSQHLTNSSSSKQMNLLPGIPTNMEPKQFVSLQHQSGQHSFGSINN
QVLIQMGGQSQSQSHSHSHSHSQGQSNTNPHHGLRPPVLSSEMLTRGGVVDMATTVYNPV
VSQASSLVDFSMNHKNDSSGSSYPLGGSLGIPNLASATPTPLQGDGNLDTKVPRRGIVSS
YDIFNDINPSGIREWGLQDVGMTFDSAQHTMQGGSGPVLLQHNRSSEREMGGQNRNSTSG
KAIFSPGVETGSHRNVGQQRNSYVAENSLRVKAEDGSSHNNTLYPEQYGDDLLAAILKQH
HQQQQQGVGQSETEFGFDGYAMDNLPA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttggtggaggtcaagtagttaacaaacaatcggtgatgcctagttcaagtgga
gcttcttggaagtccaccgctgccggcggaagtggtggcggaggcgggggcgacggtggt
gtacctgatcagtttccggcgggtcttcgggtacttgttgttgatgatgacccgacttgt
ctcatgattttggagaagatgcttagaaactgcaactatgaagtgactaaatgcaacaga
gctgaagttgccttatcatttctgagggaaaataaaaatggatttgatgtggttataagt
gatgttcatatgcctgatatggatggattcaaacttcttgaacacattgggattgaaatg
gatctccctgttatcatgatgtcggctgatgacagcaagagtgtcgttatgaagggagtg
actcatggggcgtgtgattatttaataaagccggttcgtattgaggcattacgtaatata
tggcaacacgtggttcggaaacggaaacacgagtggaaagatttcgagccatcagcaagt
gctgacgagcagaaaccacctgaagaacccgactactcgtcttctgcaaacgaagggcat
aattggaaaaacacaaagaggaggaaagatgaggatgacgaaggggaggatagagatgat
tcttcttctttgaagaagcctcgtgttgtttggtccgttgagctccatcaacagtttgtg
gcagccgttaatcagctcggaatcgataaggctgttccaaaaaaaatcttggagctgatg
aatgttcctggattaactagagaaaacgttgcgagccaccttcaaaaataccgtctttat
cttcgaagactcagcgggtcccagcatccaggcgggatgaacgccagctttatgggaggt
ccggatgcaggctacgggtccatatcatcactcaacgggcttgatcttcaagctctagcc
gccagtggtcaacttggtcaactcccacctcaaagtcttgcaaccctccaagctgcggct
ctcggcaggtcaactaactccaaatctcctatttctgcgcccgttatcgatcaaagaaac
atttttagcttcgaaaacccgaaatcgagatacacggaagtccaaagtcaacatctgact
aatagtagtagtagcaagcagatgaatttacttcctgggattcctacaaacatggagcca
aagcagtttgtcagtttgcagcatcaatctgggcagcattcttttgggagcataaacaat
caagttctgattcagatgggtggtcaaagtcaaagtcaaagtcatagtcatagtcatagt
catagtcaaggtcaatcgaatacgaaccctcatcacggcttgagaccgcctgttttgtcg
agcgagatgctgacacgtggtggagtagttgacatggcaacaacggtgtataatcctgtg
gtatcacaagcctcgtctcttgtggatttctcgatgaatcataaaaatgattcgtccggg
agtagttatccgctcgggggtagtttgggaattccaaatcttgcgtctgcaacaccaacc
cccctccaaggagacgggaacttagataccaaggtcccgagaagagggattgtttcaagt
tatgatatttttaacgatataaatccgagtggaatacgtgaatggggtttacaagatgtc
ggtatgaccttcgattcggctcaacatacaatgcaaggaggatcaggtccagtgttactt
caacataaccgttcttctgagcgggaaatgggagggcagaaccgtaattctactagtggt
aaggcgatattctctccaggggttgaaaccggaagccaccggaatgttggtcaacaacgg
aacagttatgtggcggagaattcattgagggtgaaagcggaagatggtagctctcataat
aatacattatatcctgaacaatatggagatgatctgttagctgcgattctaaagcaacac
caccagcagcaacagcaaggtgttggacagtcggaaacggagtttgggtttgatgggtac
gcgatggataatctaccggcataa
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