Cynara cardunculus var. scolymus (artichoke): 112520388
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Entry
112520388 CDS
T05604
Name
(RefSeq) integrator complex subunit 9 isoform X1
KO
K13146
integrator complex subunit 9
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112520388
Spliceosome [BR:
ccav03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112520388
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GFIT
Motif
Pfam:
Lactamase_B_6
Beta-Casp
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
112520388
NCBI-ProteinID:
XP_024984530
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Position
LG 10:5321172..5334458
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AA seq
745 aa
AA seq
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MVEGVTNWFFFDKRNTTFDRLVSSNLVLIEPHPLVAISQLIGSLISYETSLSRTGGYNLP
PCHIVNLCGFHILFDCPLDLSALTIFSPISTSLYEKLYEETSAGPSFTSLDTPLVGPMQE
TKKLLDRTNLIPAEPYYKTVESLHLWNVSLIDVVLISSPMGMLGLPFLTRTEGFSAKIYA
TEATARLSQFMMEDLIAMHMEFKQFYGPEETSFLQLFKWEELEALPPALKEIVLGKDGTE
LGSWMPLYSAADVRDCLRKVQTLKYAEEACYNGTLIIKAFSSGLEIGSCNWTLKGPKRNI
SYISSSVFSSGVAMDFNFHALRGSDVLVYSDFASWNGVHGVGDENNCSSMVTDDCSTKSG
NEYTWELSADSLLNFDESSEEMDKLNFICSCSMDSVKAGGSVLIPIGRLAIILQLLELFA
LHIDSSDVKVPIFIISTVAEELLAYTSILPEWLCKHRQEKLYSGKPVFAHEELIKEKKIH
IFPTVHSHELLMMWQEPCIVVCPHWSLRLGPVVHLLQRWHGDPNSLLVLEEGVDTDLALL
PFKPVAMKVLECSFLSGLKLEKVPPLLKLLQPKLILLPDHTKPCFAPLTESLPCLFYPEN
ETLRLPNSHNLAELHIATDLASQLTWSKMKNDELTISRLTGELFVDKGKHYLLAKKPANP
LEIRPLVHWGKLDLESLLLALEKSGVKGSIEKVSGDDGYGSNVLNVFEPGKALIQVKETS
TVISTGDKSLASLISDAVHSLLDGI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggtggagggtgtgaccaactggttcttttttgacaagagaaatacgacatttgataga
ttggtttcttcaaatctggtccttattgagccgcacccacttgtagcaatatcccaattg
attggaagtctcatatcctatgaaacaagtttgagccgaactggaggttacaatcttcca
ccatgccacatagtcaacttatgtggtttccacatcttatttgattgccctcttgactta
tctgctctaacaatcttctccccaatatcaactagtttatatgaaaagctttatgaagag
acatctgctggtccatctttcacttctttggatacaccacttgtgggtcctatgcaagaa
accaagaagcttcttgataggaccaatttaatacctgcagaaccttactataaaactgtt
gagagtctgcacctttggaatgtttctctgattgatgttgtattgatatcaagtccaatg
gggatgttggggttgccatttcttactcgcactgaaggtttttctgccaagatatatgca
actgaggcaacggcaaggctgagtcagtttatgatggaggatcttattgcaatgcatatg
gagtttaagcaattttatggacctgaggagactagtttccttcaattgttcaagtgggaa
gagcttgaagctcttccacctgcactgaaagagatagttcttggtaaagatgggacggag
cttggtagttggatgccgttatacagtgcagctgatgtgagggactgtttgcggaaagtt
cagactcttaaatatgcagaagaagcttgctataatggcactttgatcataaaggctttt
agctctggtttagaaataggttcatgcaattggactcttaaaggtccaaaaaggaatatt
tcatatatttcaagctcagtattttcatctggagttgcaatggattttaatttccatgct
ctccgaggaagtgatgtacttgtatattctgatttcgcttcatggaatggggtccatggt
gttggagatgagaataattgctcctctatggttaccgacgattgctcaactaagagtggt
aatgaatatacttgggaattgagtgctgattccttgctgaattttgatgagagctctgaa
gaaatggataaactgaacttcatatgctcatgttctatggattctgttaaagctggtggt
tctgttctaattcccattggaaggcttgccattattttgcagcttttagagttgtttgcg
ttgcatattgactcatccgatgtgaaggttccaatatttatcatttctactgtggcagag
gaattgctggcatacactagtattttaccagaatggttatgcaagcatcgacaagagaag
ctgtactctggcaagccggtttttgctcatgaagaactcataaaggagaaaaagatccac
atatttccaacagttcactcacatgaattactaatgatgtggcaggagccatgcatagta
gtttgtcctcactggagcttgaggcttggacctgttgttcatttactccaacgctggcat
ggggatccaaactcactgctagttctggaggaaggagttgacactgatcttgcactcttg
ccgttcaagcctgtagcaatgaaggttttggagtgctcgtttctttcgggtttaaagttg
gagaaagttccaccattgctgaaactgctacagccgaaattgattttgctcccggatcac
acaaaaccatgctttgctcctttgaccgaatcattgccgtgtctattttaccctgaaaat
gaaacacttcgcctgccaaattcacacaatctcgcagagctacacattgcaacagacttg
gcttcacagctcacttggtcaaagatgaaaaacgatgaattgaccatctcgagattaacc
ggtgagctatttgtggataaaggaaaacactatttacttgcaaaaaaaccggcaaatccg
ctagagatcaggcctttggtgcattggggtaagcttgatttagaaagtctattgttggca
ttagagaaatctggggtcaaagggtcaatagaaaaagtgagtggtgatgatggatatgga
tcaaatgtgttgaatgtatttgagcctgggaaggctttgatacaagtgaaagaaaccagt
actgttattagtactggtgataagagcttagcctcccttatttctgatgcagttcacagc
cttctggatggtatttaa
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