Cynara cardunculus var. scolymus (artichoke): 112520579
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Entry
112520579 CDS
T05604
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112520579
Enzymes [BR:
ccav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
112520579
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112520579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Duffy_binding
Motif
Other DBs
NCBI-GeneID:
112520579
NCBI-ProteinID:
XP_024984771
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All DBs
Position
LG 1:complement(48182793..48194116)
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AA seq
546 aa
AA seq
DB search
MADDSVTTPVVNDCDPAVVDTATDEMKLLGEAVKELPAHAVKDLMTQEVCVRCIFRLFDV
QEGIYALVSPTTLYSIIGKGTQVEAMATKSSGETEDVKILHSSQESEKSSVCSVCLGALQ
FSYCDERDVLVEKDHAEDFARTVAESVKEKCHEIASYSLEVSLPTVINENEEVIVSYMKK
KYASEVWFQEKFSSEHISVKDALKLSITHSLELLLGVKCGVSDFRIRLTYEHLGATSAED
KAGKNQCNKRQKSGAEVSSFHSSEGNGLIKCSNGTTQSGDVSDFSCQLRKVGQPCRMTLL
CSRAPIYIGGRYLKFSRNVSQTRWIIDDERKGEASVEELIGGNILPMCNGDGYKFHAAGR
EDIDVRMLGSGRPFLIEIQNARNIPSEMSIKEMEKKINSLESNLVRVKHLKVLGIQGWSL
MREGEAEKQKEYAALVWISRPIKEDDLQAVSSFKDLKVLQRTPVRVLHRRSPLEREKIIH
WMKIEEIAGNSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDVK
MDILNE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattctgtaaccacgccggttgttaatgattgtgatcccgccgtcgtcgat
actgcaactgacgagatgaagcttctcggagaggccgtgaaggaactgcctgctcacgct
gtaaaagacctgatgactcaagaggtgtgtgtccgatgcatttttcggctatttgacgtt
caggaaggtatttatgctttggtctccccaacaaccctatattccattatcggaaaagga
acacaggtggaagctatggcgactaagagttctggtgaaaccgaagatgtgaaaattttg
cactcatctcaagagtcagaaaagtcaagtgtttgttcagtttgcttaggtgccttgcaa
tttagttattgtgatgagagagatgtgttggtagagaaggatcatgctgaggattttgcc
aggacagttgctgaaagtgtgaaagagaagtgccatgaaattgccagctattctcttgaa
gtttcgttgccaacagttatcaatgaaaatgaagaagtgattgtgtcgtacatgaaaaag
aagtatgcttctgaagtttggtttcaagagaaattctcatctgaacatatttcagtaaag
gatgcactcaagctatctataacacattcccttgaactattattgggtgttaaatgtggt
gttagtgattttcgcattcgtttgacatacgagcatcttggtgccacatctgcagaagat
aaggcggggaaaaaccaatgcaacaagagacaaaaatcaggtgcagaggtttctagtttt
catagcagtgaagggaatggactcattaaatgtagtaatgggacaacgcaaagtggtgat
gtttcagactttagttgccaactgagaaaggttggtcaaccttgtcgcatgactctgctt
tgttctagggcgcctatctacattggtggtcgatatctgaagttctcacggaacgtgagt
cagacccgttggataattgatgatgaaaggaagggagaggcatctgttgaggaacttatc
ggtggcaacatccttcccatgtgtaacggtgatggctacaagttccatgctgcagggaga
gaggatatagatgtcaggatgttgggttcagggaggccttttttgattgaaatacaaaat
gcgcgaaatatcccttctgagatgtccatcaaagaaatggaaaagaaaataaacagtctg
gaaagtaacctggttagagtaaaacatctcaaggttttggggattcaaggttggagctta
atgcgtgaaggagaagcagaaaaacagaaagaatatgctgctttggtatggatatctcgc
cctattaaggaggatgatctgcaagccgtgtcctcgtttaaggacttgaaagtcttgcag
agaacgccagtaagggttctacaccgtcgaagtcctttagagcgtgaaaagattattcat
tggatgaaaattgaggaaattgctgggaattctcaatattttctacttcatctatgcacc
caggctggaacttacatcaaggaatttgttcatggagatctcggacgtacccatcctagc
attgggtcgattcttggatgtagagctgaaatcttacagcttgatgtaacagatgtcaaa
atggatatcttgaacgaatga
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