Cynara cardunculus var. scolymus (artichoke): 112520624
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Entry
112520624 CDS
T05604
Name
(RefSeq) transcription factor HY5
KO
K16241
transcription factor HY5
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112520624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112520624
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
112520624
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
FlaC_arch
GIT_CC
TSC22
WH_MCM2
Motif
Other DBs
NCBI-GeneID:
112520624
NCBI-ProteinID:
XP_024984794
LinkDB
All DBs
Position
LG 11:8662380..8665886
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AA seq
153 aa
AA seq
DB search
MQEQAATSSVAASLPSSSERSSSSALQVEVKEGMESDDEIRRVPDMGGEAAGASGGSVAH
PDRVQGTTEGTRRKGKSPADKENKRLKRLLRNRVSAQQARERKKAYLLELEVRVKELEKK
NSEVEERLSTLQNENQMLRHILKNTTAGMQERK
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagcaagcagcaacgagttccgtggcggcgagtctaccttcaagtagtgagaga
tcttcaagctctgctcttcaagtggaagtcaaagaaggaatggagagtgatgatgagatc
agaagagtgccggatatgggtggtgaagctgctggagcatcgggcggatccgttgcacat
ccagaccgtgttcaaggtacaaccgaaggtacgaggaggaaagggaaaagtccggccgac
aaagaaaacaagcggttgaagaggttgttgaggaatcgagtttcggctcaacaagcaagg
gagagaaagaaggcatacttgttggagttggaggtgcgagtgaaagagttggagaagaaa
aattctgaggttgaagagcgtttgtcgacgctgcaaaacgagaaccagatgcttagacat
atcttgaagaacacaacggctggtatgcaagagaggaaatag
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