Cynara cardunculus var. scolymus (artichoke): 112520654
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Entry
112520654 CDS
T05604
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00450
Selenocompound metabolism
ccav00970
Aminoacyl-tRNA biosynthesis
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
112520654
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112520654
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112520654
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112520654
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
112520654
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112520654
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112520654
Prokaryotic type
Other AARSs
112520654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
112520654
NCBI-ProteinID:
XP_024984858
LinkDB
All DBs
Position
LG 1:complement(25493088..25500974)
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AA seq
813 aa
AA seq
DB search
MGDIPIGGGEDRKATKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLR
GYNAIYVCGTDEYGTATETKALEENCTPKEICDKYHAIHRDVYNWFNISFDEFGRTSTPQ
QTEVCQAIFKKLMENNWLSENTMQQLYCDTCNKFLADRLVEGSCPTPGCNYDSARGDQCE
KCGKLLNPTELISPRCKVCATSPRIRDTDHLFLELPLLEGKLREYISTMSVAGSWSQNAI
HATNAWLKEGLRQRCITRDLKWGVPVPLEKFKDKVFYVWFDAPIGYVSITKCYTPEWEKW
WKNPENVELYQFMGKDNVPFHTVMFPSTLLGTAENWTLMKTISVTEYLNYEAGKFSKSKG
IGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLS
FIAKDPDSGSAKGSGYNSIIPDAPGAESHLLTKALGEKIGNYVDQYVEAMEKVKLKQGLK
IAMSISGEGNAYLQESQFWKLYKEDLPSCSIVMRTSVGVVYLLACLLEPFMPSFSIEVLK
QLNLPLQLSLSDDKGDIARANSPWQIIPVGHRIGTPVPLFKELKDEEVEFFRNKFAGSQA
DRADRAVKEEAEAKKITEKLKNTKVSDKSGKKSAKSAAESKPKAAAEQELTISRLDIRVG
VIKEVQKHPDADSLYVEKIDVGEEQPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPATMRG
IKSHAMVLCANTSDHTKVELVEPPESAAVGERVTFPGFDGQPDDVLNPKKKVWETLQVDL
HTDKELVACFKDLPFTTSAGVCKVSSISDGSIR
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggagacattccgatcggcggcggagaggatcggaaagcaacgaagcttccgattccg
ggaaaacgaaacatcctcattaccagtgccctcccttatgtcaacaatgttcctcacctt
ggaaacatcattggctgtgtgttgagtgcggatgtgttcgctcggtattgtcgactgcgg
ggatacaacgcgatatacgtatgtggcactgatgagtatggaacagctaccgagaccaag
gccctggaagaaaattgcactcctaaagaaatttgcgacaagtatcatgcaattcacagg
gacgtatataattggttcaatattagttttgatgaatttggacgaacttcaactccgcag
caaactgaagtttgccaagcaattttcaaaaagttgatggagaataattggctttctgag
aatacaatgcagcagctttactgtgatacatgcaataagtttttagccgaccggcttgta
gaaggatcctgcccaacaccaggttgtaattatgattctgcacgaggagatcaatgtgaa
aaatgtggcaagctattaaatccaacagaactcatcagtcccagatgcaaggtctgtgca
accagccctcgaatccgtgacacagaccacttgttccttgaactccctttgttggaaggt
aaactgcgtgaatacatcagcaccatgtcagtggctggctcatggagtcagaatgccatt
catgcaacaaatgcatggcttaaagaaggattgaggcaacggtgtattactagagatctg
aagtggggtgtccctgtccctcttgagaaattcaaagacaaggttttctatgtatggttt
gacgcacccattgggtatgtctcaattactaaatgctacacacctgagtgggagaagtgg
tggaaaaatcctgaaaatgtggagctatatcaatttatgggcaaggacaatgttccattt
cacactgtaatgtttccttctacacttcttgggactgcagagaactggaccctgatgaag
actattagtgttacagagtacttaaattatgaggcaggaaaattctccaagagtaagggt
attggagtttttggaaatgacgctaaggatacaaacattcctgtagaagtatggcgatat
tatttgttaaccaataggccagaggtatcagacacattatttacatgggcagatttgcaa
gcaaagctaaacagcgaactgctaaataatttaggcaatttcatcaatcgtgtcttgagc
tttattgctaaagatccagactcaggatctgctaagggttcaggatacaattccataatt
cctgatgctccaggtgcagagtcacatctcttaacaaaagcactaggagagaaaattggt
aactatgttgaccaatatgtagaggccatggagaaagtcaagctaaagcaaggattaaaa
attgcaatgagtatctctggcgagggaaatgcatatctacaagaaagtcaattctggaag
ctttacaaggaagatctcccttcctgttccatagtcatgagaacttcagtgggagtagtt
tatcttcttgcatgcctgttagaaccttttatgccatcattttccatagaggtactaaag
cagcttaatttgcctcttcaactatccctttctgatgataaaggagatattgcaagggcc
aatagtccttggcagatcatacctgttggccacagaattgggacccctgtgccattattt
aaggaattgaaagatgaagaagtggagttcttcaggaataagtttgctggcagtcaagct
gatcgtgcagatcgggctgtgaaggaagaagctgaagcaaagaaaattactgaaaagttg
aagaacacaaaagtttcagataaaagtggaaagaaatccgcgaaatctgctgctgaatcc
aaacctaaggctgctgctgagcaggaactaacgatcagtagacttgatatccgtgttggg
gttattaaggaagttcagaagcatcctgatgctgattctttgtacgtggaaaaaattgat
gttggcgaagagcagcctagaaccgttgttagcgggcttgtcaaatttatacctcttgag
gagatgcagaaccggaaggtctgtgttctctgcaacctaaagcctgcaaccatgcggggc
attaaatcacatgcgatggttctttgtgctaacactagtgatcacaccaaggttgaattg
gttgagccacccgagtctgctgctgttggggagagagttactttccctgggtttgatggt
cagcctgatgatgtactgaaccctaagaagaaggtttgggagacactacaagtggattta
catacagacaaggaacttgtagcttgctttaaagatctaccatttaccacatctgctggg
gtttgcaaggtttcatccatatctgatggatcgatacgatga
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