Cynara cardunculus var. scolymus (artichoke): 112520715
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Entry
112520715 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112520715 isoform X1
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
112520715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112520715
Membrane trafficking [BR:
ccav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
112520715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
Palm_thioest
Abhydrolase_6
Abhydrolase_1
DUF676
Hydrolase_4
Lipase_3
Motif
Other DBs
NCBI-GeneID:
112520715
NCBI-ProteinID:
XP_024984974
LinkDB
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Position
LG 11:complement(4465419..4481558)
Genome browser
AA seq
1090 aa
AA seq
DB search
MEGFKARFRLAAIVVLSIGIALVAIYDLLKPISNGCAMTYMYPTYIPISATESLSSSKYG
LYLYHEGWKKIDFNEHLKQLSGVPILFIPGNGGSYKQVRSLAAESDRAYQGGPPEPMLYQ
EACLMFEDGVEMDETDIPISNQYTRRLDWFAVDLEGEHSAMDGQILEEHTEYVVYAIHRI
LDQYKESQNARVKEGAVESGSLPNSVILVGHSMGGFVARAAVVHPNLRKSAIETVLTLST
PHQSPPVALQPSLGHYYEYINKEWRKGYEVQTSRTGAHSSNHQLSQVIVVSISGGGNDYQ
VRSKLESVDGIVPSTHGFMISSMGMKNVWLSMEHQVILWCNQLVVQVSHTLLRLVDPETG
HPISGARKRLAILTKMLHSGMPGSLSRQSHLLQQSPHLPLQKERKFAGSRKKTITACPSK
LHWSDEGLERDLYIKTPTVTILAMDGRRRWLDIKELGSNGRNTFVLVTNLLPCYGVRLHL
WPEKGTSPSDLPLSKRVIEVTSKIAQISSGPAPRQIEPGSQTEQPPPSAVFWLDAKDMHG
FRFLTISVAPSPTVSGRPPPAASMAVGQFFNPEEGRKEFSPLSLLLSMYSQKDIFIKEDH
PIAMNITFSISLGLLPATVSLETTGCGIKKSGLPVEEAGDMDSGRLCKLRCFPPVALAWD
ATSGVHIFPNLYSHTIEVDSSPALWSSAEGSEQTNVLLLVDPHCSYKTSAAVSLTASGRR
FMLLYASQIIGFAFAVVFFALMRQANAWELDLPVPSLLSAVESNLRMPLPFLLLAISPLL
IALFYSCLSPKPLPSVIGFFVVSIICYLLANGIIIILTLTTQIISHVVARVHVFFKTRWR
WWILDLSTSVLSFKVMRVINANPSLAMSLLAIALVCFVHPALGLLILLFSHVLCCHNALC
SFFTASSKARSEDLFGFGNGVRSSKSNNDENEEGLPVDENSSGTPDSARSYGETQLEIFH
HRHGLLILHLLSLLMFLPSLVAWLERLSMGHNFPWLLDSALCMGVVLHGICGSKPEFNVF
FQIPGMRGYEIRQGLVYLLAGYCCYLSGLDLAPYKAFYAMAAIGIVSFVFRIIERRNQPY
YSNRKHSHRH
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggaagggttcaaggccagatttcgattagcagcgatcgttgttctttccattgggatc
gctctcgttgctatatatgatttattgaagccaatttcaaacggttgtgccatgacatac
atgtacccaacctacattccaatatcagcaacagaaagtctgtcttcttcaaaatatgga
ctgtatttgtatcatgaagggtggaaaaaaattgattttaatgagcatcttaaacaactt
agtggggttcctattcttttcatccctggcaatggaggtagctacaagcaggtcaggtcc
ttagcagcagaatctgatagggcttatcaaggtggcccacctgagcctatgttgtaccaa
gaagcttgcttaatgtttgaggacggagtagagatggatgaaactgatattccaatatcc
aatcagtatactcgcaggcttgactggtttgcggtggaccttgaaggcgaacattctgca
atggatggtcagatacttgaagaacacacagaatatgtagtatatgccattcacaggatc
ctggatcaatataaagaatctcaaaatgctcgagtaaaagaaggtgccgttgaatctggt
agtctgcctaatagtgtcatattggttggccactctatgggtggttttgttgctagagct
gcagttgtgcaccctaatttgagaaagtcagccattgaaactgttcttacattatcaact
ccgcatcagtcacctcctgtggcactgcagccatcattgggtcactattatgagtacata
aataaggaatggagaaagggttatgaggtccaaacctctagaacaggagctcactcgtcc
aatcatcaactatctcaagtgattgttgtctccatttctggtggtggtaatgattatcag
gtgaggtcaaagttagaatcagttgatggcatcgtcccatctacccatggttttatgatt
agtagcatggggatgaagaatgtatggctatcaatggagcaccaggttatcttatggtgt
aatcaactcgttgtgcaagtttcacatactcttcttagattggtagaccctgaaactggt
catccgatttctggtgccaggaaaagactagcaattcttacaaaaatgcttcatagtgga
atgccaggaagtttgtcaaggcaatcgcatttacttcagcagtcaccacatcttccttta
cagaaagagagaaaatttgctggatctcggaagaaaacaattactgcatgccctagtaaa
cttcattggagtgatgaaggacttgaaagggatctttatatcaagacgccaacagtaact
attttagcaatggatggcagaagacgatggttggacataaaagaactgggatcaaatgga
agaaacacctttgttctcgtgacaaatcttcttccctgttatggggttagacttcatctt
tggcctgaaaaaggaacttccccatcagatttgcctcttagcaaaagggttatagaagtg
acatcaaagattgcacagatttcttcggggccagcaccaaggcagattgaaccaggaagc
cagacagaacaaccaccaccatcagctgtattttggttggatgcgaaggatatgcatggt
ttcagattcctgacaatctcagttgcaccgagcccgactgtttcagggagacctccgcca
gcagcttcaatggcagttgggcagttcttcaacccagaggaagggcgtaaagagttttct
cctctgtctttgctcctctctatgtattctcagaaggatattttcatcaaggaggatcat
cctattgcaatgaatattacattcagtatcagcttgggtcttctgcctgctacagtgtct
ctggaaactacaggatgcgggataaagaagtctggacttcctgttgaagaggctggagac
atggatagtggcagactttgcaagctccgatgctttcctcctgtagcccttgcatgggac
gctacatctggtgttcacatatttcctaatctgtattctcatacaattgaggtggattct
tcacctgcactttggagctcagctgagggatctgagcagaccaacgttctgttactggta
gatccacattgttcctataaaactagtgctgctgtttctctgaccgcttctggccgtaga
tttatgcttttatacgcctcccagattattggtttcgcctttgctgtagtcttttttgct
ctaatgcggcaagcaaatgcatgggagcttgatctgcctgttccttcattgctgtctgca
gtagaatcaaatctgagaatgccactgccatttcttctcttggctatttcaccccttctg
attgctttgttttattcctgtctaagtccaaagcccttaccttccgtcattggcttcttt
gttgtctcaataatttgctacctgttagcaaatgggatcataatcatattgacactgact
acccaaattatctcccatgtggttgccagagtacatgttttttttaaaacaaggtggcga
tggtggatacttgatctctccactagtgtcttgtcattcaaggtgatgagggtcataaat
gccaatccatcattggctatgtcactgcttgctattgctttggtctgctttgtccatcca
gcattaggtctcctcattttgctgttctctcatgtgctatgctgtcacaatgccttgtgc
agcttttttacagcttccagcaaggctcgaagcgaagatttatttgggtttggaaatggt
gtgaggtcatccaaatccaacaatgatgaaaacgaggaaggtttacctgtggatgagaac
agttccggcaccccagactctgcacgaagctatggagagacacagctagagatattccac
caccggcatggcttgctaatcttgcatcttctttctctgttgatgtttcttccttcactc
gttgcttggttagagaggctaagtatgggccacaacttcccatggttgttggattctgcg
ttgtgcatgggtgtcgttcttcatggtatttgtggctcaaaacccgagtttaacgtcttc
tttcagatcccaggaatgagagggtatgaaataagacaagggttagtgtacctccttgcc
ggctactgttgctatctttcaggtttagatttggctccttacaaagccttctatgccatg
gctgccattggaatcgtttcatttgtttttagaatcatcgaaagaagaaaccaaccatat
tatagcaatagaaagcattctcatcgacactga
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