Cynara cardunculus var. scolymus (artichoke): 112520719
Help
Entry
112520719 CDS
T05604
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112520719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112520719
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112520719
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
HECT type E3
112520719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
112520719
NCBI-ProteinID:
XP_024984983
LinkDB
All DBs
Position
LG 11:20551307..20586301
Genome browser
AA seq
1033 aa
AA seq
DB search
MFFSGDPSNRKRVDLGGRSSKERDRKKLLEEAKLERSRRSWMRQQNSAALIIQKCFRGRK
VVKAERGNVREQFYTTYGKHCERVDRQCFGPDSDFLRDLLYFLSPQNVSDFSTLVEACRL
LSQFAKDSGDVLNLFGGPDYSSKHALVNYRVKKLVYACIQAVHHNRYQLKDQLLSTSLDS
GTSTIILLKAAALLIDPKLPWSCKIVSYLMQQNIYRIFREIVITGKESLNCEGCVGKVSL
MERVLALVIAHTGQGHCVCQDIDLQWSFASQILTIPFFWQIFPYLKEIYVSRGLCQHYLN
KMATCTKSYEKVLPIDISAEFPAYACLLGNLLEAVGVALTRPACSYDMAIDFATVATLLL
EVLPPIQTSNTGSREENSVLGDDDMITDDEPAVAPLSKELEKQISNAIDPRFLLQLTNVL
FGGSSLDADSCKDKCNDNEAAAVAAACSFLHVTFTILPLERIMTVLAYRTELVSVLWNFM
KQCHEKQNWSSLSAVSQYLPSDAFGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLND
IRLLIVILRQALWQILWLNPVAPMKFTTNTLFLKKHRVEFVQYRVSVVASELLSQLQDWN
NRRQFAHPSDFHADGVNDHFISQAMIENTRAYDILKQAPFLVPFTSRVKLFTSQLAAIKE
RPGSHSLFNRSSFKIRRDHILEDAFNQLSTLPEEDLRGVIRVTFVNEFGVEEAGIDGGGI
FKDFMENITRAAFDMQYGLFKETIDHLLYPNPGSGMIHEQHLQFFHFLGIILGKAMFEGI
LVDIPFATFFLSKLKQKHNYLNDLPSLDPELYRHLIFLKRYEGDLSELELYFVIVNNEFG
EQTAEELIPGGKNIRVVNDNVITFIHLVANHRLNTQIRQQSSHFLRGFQQLIQKDWIDMF
NEHELQLLISGSVDGIDVDDLRSNTNYAGGYHHEHYVIDMFWEILKNFSLENQRKFLKFV
TGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEHMEQKL
LYSINAEAGFDLS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcagtggcgatccttcgaatcggaaacgagttgatttaggcggtcgtagttca
aaggaaagagatagaaagaaacttttggaggaggcgaagttagagaggagtagaagatca
tggatgcgtcagcaaaactcagctgctctcataattcagaaatgctttagaggaagaaaa
gtggtaaaagctgagcgtggtaatgtgcgagagcaattttataccacttatggcaagcac
tgtgaaagagtagacaggcaatgctttggaccagattcagattttcttcgggacttgcta
tattttcttagtccacagaacgtttcggacttctccacccttgtggaggcatgccgtttg
ctttcacaatttgccaaagacagtggggatgttctaaacctctttggtggcccagattat
tcatctaagcatgctctggtgaactacagggtgaagaaacttgtttatgcctgtattcaa
gctgtacatcataatagatatcagttaaaggatcaactgttatccacatctttggactcc
ggtacatcaacaattatcttgttgaaagcagcagcattgttgattgatcctaagcttcca
tggtcatgtaagatagtcagctatcttatgcaacaaaacatatataggattttccgggag
attgttattacaggaaaggaaagtttaaactgtgaaggctgtgtcggaaaagtatctttg
atggagagggttcttgccctagttattgctcataccggtcaaggacattgtgtttgtcaa
gatatcgacctacaatggagttttgcctcccaaattctaacaattccgtttttctggcag
atttttccttacctaaaggagatttatgtttcgcgggggctgtgtcagcattatctcaat
aagatggcaacatgtacaaaaagttatgaaaaagtgttacctattgacatatcagctgaa
ttccctgcttatgcttgccttcttggtaatttactggaagcagttggagttgctttgact
cggcctgcatgttcatatgatatggccatagactttgctactgttgcaacattattgctg
gaggtacttcctcctatacaaacatcaaatacaggaagtagagaagaaaattcagtattg
ggtgatgacgatatgattactgatgatgaaccagctgttgcacctcttagtaaggagttg
gaaaagcagatttcaaatgcaatagatccacgctttcttttacagctgacaaatgttctg
tttggaggctcttcacttgatgctgattcatgcaaagataaatgtaatgacaacgaagcg
gcagctgttgctgcagcgtgttcttttcttcacgtgactttcaccattttaccccttgag
cgtatcatgacagttctagcttatagaacagagttggtatctgtactctggaatttcatg
aagcaatgccatgagaaacaaaattggtcctccttgtctgctgtatcacagtacctgcca
agcgatgcatttggttggctactgcctttggcagttttctgtcctgtgtacaagcacatg
cttatgattgttgacaatgaggagttctatgagcaagaaaagccgttgtcactcaatgac
atcagattattaattgttatcctgagacaggctttgtggcagattctttggttaaaccct
gtggcaccaatgaaatttactacaaacactcttttcttaaagaagcaccgtgtagaattt
gttcagtatagggttagtgttgtggcatctgaactactttcccagttgcaagattggaat
aatagaaggcagtttgcacacccaagcgacttccatgctgatggtgtcaatgatcacttc
atttctcaggctatgattgaaaacacaagggcatatgacatactaaaacaagctcctttc
ttggtgccatttacaagcagagttaaattattcacttcacagcttgctgcgatcaaggaa
aggcctgggtctcattctctttttaaccgaagcagttttaagataaggcgagaccatata
ctggaagatgcttttaatcagttaagcacattaccagaagaggatcttcgtggagtgatt
cgggttacttttgtcaatgaatttggagtggaggaggctggtattgatggtggtgggatt
tttaaagacttcatggagaatatcactcgagcagcttttgatatgcagtatggactattt
aaggagacaatcgaccacctcctctatcctaatcctggatcaggaatgatacacgaacaa
catctccagtttttccattttcttggaattattcttggaaaggctatgttcgaagggatt
cttgttgatataccatttgcaacttttttcttgagcaaactaaagcaaaagcacaactat
ttaaatgatttgccttccttggatccagaattgtatcggcatcttatctttctaaagcgt
tatgaaggtgacttgtcagagttagagttatactttgttattgttaataatgaatttggg
gagcaaacagcagaagagctgatcccaggtggaaagaatatacgggttgtgaatgataat
gttatcacctttattcatcttgttgccaatcaccgcctgaatactcagatacgtcaacaa
agttcgcatttcttaagaggatttcaacagcttatacagaaagattggattgacatgttt
aatgagcatgaacttcagcttctgatatcaggatcagtcgacggtatcgatgtcgatgac
cttcggtcaaacacaaattatgctggtggctatcatcatgagcactatgtcattgacatg
ttttgggagatcctcaagaacttctccttggagaatcaacggaagtttttgaagtttgtg
actggatgttcaagagggcccttgctaggattcaagtatttggagcctttattctgtata
caacgagctgctggtagtgcttctgaagaagctcttgacaggttacccacatcagctact
tgtatgaatctgttaaagcttcctccatatagaagtaaagagcacatggaacagaagctg
ttatattctataaatgctgaagcgggatttgatttgagttaa
DBGET
integrated database retrieval system
