Cynara cardunculus var. scolymus (artichoke): 112520764
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Entry
112520764 CDS
T05604
Name
(RefSeq) tubulin alpha-3 chain-like
KO
K07374
tubulin alpha
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04145
Phagosome
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112520764
09142 Cell motility
04814 Motor proteins
112520764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112520764
03036 Chromosome and associated proteins [BR:
ccav03036
]
112520764
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112520764
04147 Exosome [BR:
ccav04147
]
112520764
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112520764
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112520764
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112520764
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112520764
Exosomal proteins of other body fluids (saliva and urine)
112520764
Exosomal proteins of colorectal cancer cells
112520764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Romo1
DUF7281
EAD9
Motif
Other DBs
NCBI-GeneID:
112520764
NCBI-ProteinID:
XP_024985071
LinkDB
All DBs
Position
LG 11:complement(4299529..4301824)
Genome browser
AA seq
447 aa
AA seq
DB search
MREIVSIHVGQAGIQVGNSCWELYCLEHGIKPDGCMSIDNTSSSGSNDSFGTFFSEGSSG
KYVPRAVFVDLEPTVIDEVRTGSYRKLFNPKQLIAGKEDAANNFARGHYTVGKAVVDECV
DRVRKLADNCSNLQGFMVFNAVGGGTGSGLGSLILERLSNEYGKTLKLGFTIFPSPQVST
SVVEPYNSVLSTHSLIEHTDIVVQLDNEAIYDICKKKLDMERPTYRNLNRLISQTISSLT
TSLRFNGSMNVDISEFQTNLVPFPRIHFMLSSYAPIISSAKAYHELLSVPEITNAVFDPS
SMMAKCDPRHGKYMACCLMYRGDVAPKDVNTAVGSIKTKKTIQFVDWCPTGFKCGINNQA
PSAVPGGDLAQVKRAVCMISNNTAVSEVFSRIDHKFDLMFAKRAFVHWYVGEGMEEGEFS
EAREDLAALEKDYEEVAQDGEEEGDEY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatcgtaagcatacacgttggacaagctggaattcaggtcgggaattcgtgc
tgggagctatattgccttgaacatggcattaaacccgatggttgtatgtctattgataat
acctcatcaagtgggtcaaacgattccttcggcaccttcttcagcgaaggcagttcggga
aagtacgtcccgagggctgtatttgtcgatcttgagcccacggtcatcgatgaagttaga
accggaagctacaggaagctcttcaatccaaaacaactcattgccggtaaggaggatgca
gctaataacttcgccagaggacattacacggttgggaaagcagtggtcgatgaatgtgtc
gatagagtgagaaaattagcagacaattgcagtaatttgcaagggtttatggttttcaac
gccgtgggtggtggcactggctctgggttaggatcgttgatcttagaacgcttgtccaac
gagtatgggaaaacgctgaaactcggcttcacaatctttccatctccacaggtttcgacg
tcggttgtggagccttacaatagtgtgttatcgactcactcgttgatagaacacaccgac
attgtggtgcaactagacaacgaagcgatatacgatatttgcaagaagaagttggatatg
gaaaggccgacttacaggaacttgaatcgcttaatttctcaaacgatttcgtctttaaca
acttccttgaggtttaatggatccatgaacgtcgacatttcagaattccaaacaaatctg
gtcccattccctcggatccacttcatgctttcatcatacgcaccaatcatctcatctgcg
aaggcctaccacgaactgttatcagttccagagatcacaaatgccgtatttgatccatct
agcatgatggctaagtgcgatccaagacacggtaaatacatggcttgttgtctcatgtat
cgtggagacgttgctccaaaggacgttaatacagccgtcggatccatcaagaccaaaaaa
acgattcaatttgtcgattggtgtccgacggggttcaagtgcgggatcaacaaccaagct
ccatcggcggttcccggtggagatctggcgcaggtgaaacgagcagtgtgcatgataagc
aacaacaccgccgtgtcggaggttttcagtcggatcgatcataagtttgatttgatgttc
gccaaacgagcgttcgttcactggtatgtgggcgaaggcatggaagaaggcgagttttca
gaggctcgtgaagatcttgcagcgctggagaaagattacgaggaagtggcgcaggatggg
gaggaggaaggagatgagtattaa
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