Cynara cardunculus var. scolymus (artichoke): 112520768
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Entry
112520768 CDS
T05604
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a-like isoform X1
KO
K14972
PAX-interacting protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112520768
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
112520768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15_C
KIX
Motif
Other DBs
NCBI-GeneID:
112520768
NCBI-ProteinID:
XP_024985078
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All DBs
Position
LG 11:complement(15085358..15105700)
Genome browser
AA seq
1257 aa
AA seq
DB search
MDTSNWRPNQGGTGGGDSSMESVDWRTQLPADTRHKIVNKILDNLKKHLAFSGQEKLHEI
KNIALRFEEKIYHGATSHSDYMRKISIKLLAMENRAANPIANSLQSNSAGNSANPSDPGS
QGMQQVNNQGQSLNHPQAGQQILPPSIHNNIASSGGQGSAGISSALQPGSSLSQSTMPII
SGQNSGLQNIQNISRVQPNSVGNSMGQGIPSNNFVSQRQIPGRQQLAPQPQQQPQNSQHY
LYQQQLHQIAKQKLQQNSSTTSVQSHMQQQHQNLLQPSHFQPSQQSVMQPTMLQPSSLST
VQQNQQPIDPQSAQPVMQHHQQTVLRQQRQQQQASIVHQQQVLSTQQQQQQPNTMGQQTS
AINLQHNQLIGQQSSYSEMQQQQQSRLLGQQSNISNVQKLQHHSIGQHNNFSAVHQQQLG
PQSSSTGQQQQQHQLFGTQSGSTTMVNNQHSAHLLQSKVSIPQQNQPTQGQRSQPELQQQ
VMPQLQTQSGQLQHQLNTKLQPNLSQWDMQQRLPTSGAFQQQNVIDQQKQLFQQQRAMPE
ASSTSSDSTAQTGNPNGGDWQEEVYQKLKAMKDKYMPELNDMYQKIIGKLQQHDSLPQQP
KGEQVEKLKMIKHVLERCMAFVQVPKSNITPNYKEKLGIYEKQIVNIISTHKRKPGVPPQ
QAQPLPPPHIHLTQENQMNPQMQSMNLQNNMGSLQHNSVLPSNAQQNMMSATQPTSNLDP
GQNSTMNSLNINPLSSQGGMGMLQPNSSILQHQQLKQLPYRQMQQQYLHKQQLIQQQHQF
QRQTKQQQQNGQLHMNQLPQLQPINDGNELKLRQQIGVKPEPLQQQQVASQRPAYHQQLK
SGAPFSPQLLSASSPLTPQHSSPQIDQQNLLNSLTKSGTPLQSANSPFIVSSPSTTSTSH
MPGESEKVNSGVSSLSNAGNIGHQPTGAVLPTQSLAIGTPGISASPLLAEFTSPDGNHGN
GASVVSTKSSAIEQPIEHLLKVVKSISPKSLSASVSDIGSVVSMIDRIAGSAPGNGSRAA
VGEDLVAMTKLHLQARTSGTPNGTRKMKRFTSAIPLNGVSSANSVNDSFKHFNFVEASEL
ESTATSTIKRPRIERRHPLLEEIRDINLGLIDTVVDISKEDADSAEGGKGTIVKCSFIAV
ALAPNLKSQYDSPRMSPIQPLRLLVPANYPNCSPILLDKFPADISKEYEDLSVKAQWRFG
SCVRQLSEPMSLEEMVRTWDVCARTVISEYAQQSDGGTFSTKYGAWEDCLTLTGTAA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggatacaagtaattggaggcctaatcaaggtggaactggtggtggtgattcctccatg
gaatctgtcgactggaggactcagttaccagcagatacgcgccataaaattgtcaacaag
atattggataacttgaagaagcatcttgcattttctggacaggagaagctacatgaaatt
aagaatattgctctgaggtttgaggagaagatttatcatggagcaacaagccattctgat
tatatgcggaaaatatctatcaagctgcttgccatggagaatagagcagcaaatcctatt
gccaattctttgcagtccaactctgccggtaatagtgcaaacccctctgatccaggctct
cagggcatgcagcaagtcaacaaccaaggccaatcacttaatcatcctcaagcaggtcag
cagatcttacctccgagcattcacaataatattgcttcatctggaggacaaggttctgct
ggtatatcatctgcattacaacctggcagtagcttatcacagtctaccatgccaattatt
tccggccaaaattcaggcttgcagaacattcaaaatatttctagggttcaaccaaattct
gtaggaaatagtatggggcaagggataccttccaacaattttgtaagtcaaaggcagata
ccaggaaggcaacaacttgctccccaaccgcaacagcagcctcaaaactcgcagcattat
ctttatcagcagcagttacatcaaattgcaaagcaaaagctccagcagaatagtagtaca
acctcagtgcaatcacacatgcaacaacagcatcagaacttgttgcagccaagtcatttc
caaccatctcaacaatccgttatgcaacctacaatgttgcaaccatcttctctctctacc
gttcaacaaaatcagcaacctattgatcctcaatcagcacaacctgtgatgcaacaccat
caacaaacagtcctaagacaacaaaggcagcagcaacaagcatccattgtccaccagcag
caagtattgtcaacacagcagcagcagcagcaaccaaatacgatgggccagcagacaagt
gcaataaacttgcagcacaaccagctcataggacagcaaagtagctattctgaaatgcag
cagcaacagcagtctaggttgctgggccagcagagtaatatttctaatgtgcagaagttg
cagcatcactcaattggtcaacataacaacttctctgctgtgcatcagcaacagttgggc
cctcaaagtagttccacaggtcagcaacaacagcagcaccagttatttggaactcaatct
ggtagcaccaccatggtgaacaatcaacattcagcacacctgctgcagtctaaggtctcg
attccacaacagaatcagccaacacaaggccaacggtcacaaccagaattacagcagcag
gtgatgccacaattacaaacacagtcaggtcagttgcagcaccaattaaatacgaaactg
cagccaaacttgtcacaatgggatatgcaacagaggcttccaacatcaggtgcatttcag
cagcaaaatgtaatagatcagcagaaacagctattccaacaacagagagctatgccagag
gcttcatcaacatcatcagattccacagctcagacaggaaatccaaatggtggagattgg
caagaggaggtgtatcaaaagttgaaagctatgaaggataagtatatgccagagttgaat
gacatgtatcagaaaatcataggcaaattgcagcagcatgattcgcttcctcagcaacca
aagggtgagcaagttgagaagctgaaaatgattaagcatgtattggagcgttgcatggca
ttcgtacaagttcccaaaagcaacataactcccaactacaaagaaaagcttggtatatat
gagaagcagattgttaatatcataagcacacataagcggaaacctggggtcccaccacag
caagcacaaccacttcctccaccacatattcatttgacacaagaaaatcagatgaacccc
cagatgcagtcgatgaacttacagaataatatgggtagtttgcagcataattctgtcctt
ccttcaaatgcacagcagaacatgatgagtgcaacacagcctacttccaatcttgaccca
ggacagaatagcacaatgaactcgttaaacataaatcctttgtcatctcaaggagggatg
ggtatgctgcagccaaattccagcatacttcaacatcagcaattgaagcaacttccatat
cgccaaatgcagcaacaatatctacataaacaacaactaattcagcagcagcatcaattt
cagcgacaaacaaaacagcagcaacaaaatgggcagttgcatatgaaccaactacctcag
ctgcagccgataaatgacggtaatgagttgaaactaagacagcagattggagtgaagcca
gaacctttgcagcaacagcaagtagcatcccagcgcccagcttatcaccaacagttgaag
tcaggagctccattttcacctcaactgctttcggcttcttctccactgactccccagcat
tcatctcctcaaattgaccagcaaaacttgttgaattctcttactaaatctggtacacct
ttgcaatctgcaaattcaccatttattgtgtcatctccatcaactacctctacgtctcat
atgccgggagagtctgagaaagttaattctggtgtgtcgtcactttctaacgctgggaat
attggacatcaaccaactggtgcagtgttacctacccagtctctcgctattggcacacct
ggaatatcagcctcgcctttgcttgcagagttcacaagtccagatggaaatcatggaaat
ggggcatcagttgtttccacaaaatcaagtgctatagaacagcccatagagcacttactc
aaagtggtaaagtcaatctcaccaaaatccttgagtgcctcagttagcgacattggttcg
gttgttagtatgattgatagaattgcaggatcggcaccaggtaatggatcaagagcagca
gttggggaggacttggttgccatgacaaaattgcatcttcaagcaagaacttccggcacc
ccaaatggaacaaggaaaatgaaacgctttacaagtgcaatccccttaaatggtgtatca
tctgctaacagtgtaaatgatagctttaagcattttaactttgtggaggcttcagagttg
gaatctactgcaacttctactataaaaaggccccggattgagaggaggcatcccctattg
gaagaaataagagatataaatctgggactcatagatactgtggtagatatcagcaaggaa
gatgctgattcggcagaaggtggtaaaggaaccattgttaagtgctcatttattgcggta
gctcttgctccaaatctcaagtcacaatatgattcaccacgaatgtcacctatacaacca
ttgcgattgcttgttcctgcaaattatccaaattgctccccaatactcttggataagttt
ccagctgacatcagcaaggaatacgaggacctttctgtaaaagcacagtggcggttcggt
agttgtgttaggcagctttcggaacccatgtcgcttgaggagatggtacggacttgggat
gtttgtgctcgtacggttatttccgagtacgcgcagcaaagtgatggtggtaccttctct
acaaaatatggagcctgggaggattgcctcaccctcactggtactgctgcatga
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