Cynara cardunculus var. scolymus (artichoke): 112520807
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Entry
112520807 CDS
T05604
Name
(RefSeq) protein CNGC15b-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112520807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112520807
Ion channels [BR:
ccav04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112520807
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
112520807
NCBI-ProteinID:
XP_024985155
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Position
LG_11
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AA seq
698 aa
AA seq
DB search
MSSSKRYVRLRNYIFLLYSSSCRYANKIETFDGSSTRFDADIETPNPNPSSVKKDDDLKL
GRKLSRVFSEDYAKTNKTILDPRGAPLNQWNQVFLIAALISLAVDPLFFYLPVIKEDMCL
DENVTLKITLTIIRSIVDIFYAIKIYVRFRTAYVAPSSRLLGRGELILDSSSISERYLKG
EFWLDFLATLPIPQVMTWFHMVNTAMMSTKTSVLYFIMIQFLLRLYLTFRLGSHISKQAG
LVANVAWVGAAYNLVLFMLAAHVIGAMWYLLAIERQGLCWVEICDLETECKRKYFDCVNV
NLPLREAWYPTSNVSRICTDPDNFQYGLVEDAVQYSIASAGFFKKYSYCLWWGLRGLSSA
GQELQASPFLAETHFCILIGITGLVLFALLIGNMQQYLESRTKRLEEYRVKRMDTEQWMH
HRHLPDELRQRVRKHDLYKWITTRGVDEEEILRALPLDIRRDIKRYVCAELVRRVPLFDQ
MDERTVDAICERLKPVICTPGTCLVREEDPTNEMLFIMRGHLDSYTTGGGRSGFLNQCEI
GPGDFCGEELLTWALDPRPSVIIPSSTRTVTAISEVEAFALTSEDLKFVATQFRKLHSKK
LRHTFRVHSHQWRTWAACFIQAAWKRYKRRNEAAMLKAKETSNTPTISNKLNRASKKGAS
LSMLATSIRRGRIFESNDVIHSPVPKPKDPEFLEDNHE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctagttctaaacgatatgtcaggttgagaaattacatatttcttctatattctagt
tcctgtcggtatgctaacaagattgaaacttttgatggttcttctaccagatttgatgct
gatattgaaaccccaaatcctaatccttcatctgtgaagaaagatgatgatctgaaactg
gggagaaagctatcaagagtgttctcggaggactacgcaaaaaccaacaagacgattctt
gatcctcgaggcgcacctttgaatcaatggaaccaagtttttctgattgcagcccttatt
tcgcttgctgtagatcctcttttcttttacttgcctgtgatcaaggaggatatgtgcctg
gatgagaatgttaccctcaagataaccctcactatcatccgttcgattgttgatatcttt
tatgccatcaagatttacgttcggttccgtacagcttatgtcgctccttcttctcgcttg
cttggaagaggagagctgattctagactcttctagtatttccgagaggtatctgaagggt
gaattttggctcgatttcttggccacgcttcctattccacaggtgatgacttggttccac
atggtcaatacggcgatgatgagtacgaaaaccagcgtgctatactttatcatgattcag
ttcctcctgaggctttatcttacatttagactcggatctcatatatcaaagcaagccggt
cttgtggctaatgtagcgtgggttggggctgcttacaatctcgtgctttttatgttggct
gctcatgtcattggagcgatgtggtatcttctagcgatcgagaggcaagggctatgctgg
gtagaaatatgcgatcttgaaacggaatgcaaacgcaaatatttcgattgtgttaacgtc
aatcttccgcttcgtgaagcgtggtacccaactagcaacgtctcacgtatttgtacggat
ccggacaacttccagtacggattggtcgaggatgcagtacaatacagtatcgcttcggca
ggtttcttcaaaaagtattcctactgtctctggtggggtctcagaggcttaagttcagca
ggccaagaacttcaagcaagtccatttctagcagaaacacacttttgcatactcattggg
attactggattggtactgtttgctttgctcattggcaatatgcaacaatatctcgagtct
agaactaagcgactagaggagtatcgggtgaaacggatggataccgagcaatggatgcac
caccggcatctgccagacgaactgaggcagcgggttcgcaaacacgatctttacaaatgg
attacaactcgaggggtcgatgaagaagaaatcctccgagcccttcctttagatattagg
agagatatcaagcgttatgtttgcgcagagctcgttagaagggttccgctttttgatcaa
atggatgaacgcaccgtggatgcaatatgcgaaagactaaaacccgtgatatgcacaccg
ggaacgtgcctagttcgagaagaggaccccacaaacgagatgttgttcatcatgcgtggt
cacttggattcctacacgacaggtggaggtcgctctggtttcttgaaccagtgcgagatt
gggcccggtgacttttgtggtgaggaattgctgacgtgggcactggacccacgcccaagc
gtcatcattccatcatccacacgcacagtcaccgccatttctgaggtggaagctttcgct
ctcacctcagaagacctcaaatttgtcgccacgcagtttcgtaagctgcacagcaagaaa
ttgcggcacacgttcagggttcactcacaccagtggaggacttgggccgcttgcttcata
caagcagcctggaaacggtacaaaaggcgaaacgaggctgctatgcttaaggctaaagag
acttccaacacgccgaccataagcaacaagctgaaccgagcaagtaagaagggggcgagt
ttgtcgatgttggcaacaagtataagacgaggccgcatattcgaatccaacgatgtcatt
catagcccggtgccaaagccgaaggatcccgagtttttagaagataatcatgagtaa
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