Cynara cardunculus var. scolymus (artichoke): 112520809
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Entry
112520809 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like isoform X1
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112520809
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112520809
04121 Ubiquitin system [BR:
ccav04121
]
112520809
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112520809
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112520809
Membrane trafficking [BR:
ccav04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112520809
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112520809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
TniQ
EndoS_Ig-like
Motif
Other DBs
NCBI-GeneID:
112520809
NCBI-ProteinID:
XP_024985160
LinkDB
All DBs
Position
LG 11:5133368..5142626
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AA seq
908 aa
AA seq
DB search
MTHRFKDRLAQLFAFSLLANFLSLKILPTVRHILSKTLDFLKMDSLFFSADGGDDDSLFG
NSSARSIQSLSDLDDERLYLVDHRWWNETRESLFREVNGILYPTSSGLSDDFDLEIILEM
RTSESDSLDCRGEEQGVSGREYALVSEWMFYRALKWHYDMKYVGNSVAIEDNKADFFSLQ
VRLSISATTNSLVVRISQKGNEIGAFNKSCQIFCVKSGLLNIWDFSGQITKFFLQGSMLS
DKSEQVNEEIFLELQVYGLSFDVMRKENGMAVEDLKTDGFSSGSSLKVNGHSDNVNSCVR
LGHPPFPGSFSESYNLGLTGLYNLGNTCFMNSAIQCLVHTPQLVNYFLGDFRKDLNFENP
LGMNGKLALAFGDLLRQLWTPGATSVAPRAFKSRVAGFAPQFSGYNQHDSQEFLAFLLDG
LHEDLNRVKIKPYNEIKDTDGVSDKEVADEHWQNHLARNDSIIVGMCQGQYRSTLICPLC
KKHSVTFDPFIYLSLPLPSTTMRTMTLTVLSTDGTTLPISVIVTVPKCGKFTDLIQALSI
ACSLREDETLLVAEIYNHRVLHFLDKPADSIELVRDYDRLVAYRLPKDEDNFPLVVFTHR
RFEEQYGQGSPALKEFGIPLVARIPDCTDGSKIQKKFLKLLHPFLMPDEFSSDAFDDSVN
TVNQDIEMEEKVDENAFNGVPNSEVNDRSFVDDNFQFYFVQQEHFSEGTKMLMDEPLLIP
ESRKITVLVSWPEEMLKRYDTCILSHLPETGGLSSKKPPESASLYKCLEAFLKEEPLGPE
DMWYCPKCLKHCQASKKLDLWRLPEILIIHLKRFSYNQFLKDKLETFVDFPIDNFDLSNY
TVHKEGQSSFLYKLYAVSNHYGGMGGGHYTAFVQCGQQWYEFNDSQVFPISEDQIKTSAA
YVLFYKRI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcgcttcaaggatcgactcgctcaactcttcgctttctctctcctcgccaac
tttctctctctaaaaatcctccccaccgtcagacacatcctgtccaaaaccctagatttt
ctcaagatggattccctgtttttctctgcagacggcggcgatgacgactctctattcgga
aacagtagtgcccgatcaattcagagtctgtcagacctcgacgacgagaggctttatctc
gtcgatcacaggtggtggaacgagacgcgggagtctttgtttagggaagtgaatggtatt
ttgtaccctacgagttcgggattgtctgatgattttgacttggagattattctggaaatg
agaacaagtgaaagcgatagtcttgattgcaggggagaagagcaaggggtttccggacgt
gagtatgcgttggtttccgaatggatgttctatcgagctcttaaatggcactatgatatg
aagtatgtggggaactctgtagccatagaagataataaggcagactttttttcgttgcaa
gttaggctttcaatttctgcaacaacaaattcgttggttgtaaggattagccaaaagggc
aatgagattggagcttttaataaatcctgccaaatattttgtgtcaagtctggcttgttg
aacatatgggatttttcagggcaaataaccaagttttttttacaaggcagcatgctatct
gataaatctgaacaagtgaatgaagagattttcttagagttgcaggtttatggcttgtct
tttgatgtgatgcgaaaagaaaatgggatggcagttgaagacttgaaaactgatggattt
tcttccggtagttcactgaaggtgaatggccactctgacaatgtcaactcatgtgtcaga
cttggccatccaccatttcctggtagcttcagtgaatcttataacttgggtttgactgga
ttgtacaatctcggcaacacatgttttatgaacagcgctatccagtgcttagtgcatact
ccacagcttgtcaattattttcttggggacttcagaaaagatctaaacttcgagaatcca
ctgggcatgaatgggaagctagctctagcatttggagacttgctaaggcagctatggaca
ccaggggctacctcagtggctccaagagcattcaagtcaagagtagctggttttgctcct
cagtttagtggctacaatcagcatgattctcaagaatttcttgcttttctactggatgga
ctccatgaagatctcaatcgtgttaaaatcaagccttataatgagataaaagacactgat
ggagtttccgacaaagaagtagcagatgaacattggcagaatcatctagcccgaaatgac
tccataatagttggcatgtgccaggggcagtatcggtcaactttgatatgtcctctttgc
aagaagcattctgttacatttgatccattcatatatctgtctttgcccttgccttcgaca
acaatgaggactatgacattgacggtattgagcactgatgggactactttgccaatttca
gttattgtgactgtcccaaagtgtggaaagtttacggatctcattcaggctttgagcatc
gcttgctctttgcgggaggatgaaaccttgctggtggctgagatatacaaccaccgcgtt
cttcattttttggataagcctgctgactccatagagctggttagggattatgaccggctt
gttgcttataggctacctaaggatgaggacaattttcccttggttgtatttacgcatcgg
cgttttgaagagcaatacggtcaaggatctccagctttgaaagagtttggcattcctcta
gtagcaaggattcctgattgtactgatggttccaagatacagaagaaatttctcaaatta
ctccatccatttctgatgccggatgaattttcttcagatgcttttgatgattctgtaaac
accgtcaatcaagacatagaaatggaagaaaaagttgatgaaaatgcatttaatggtgtt
ccaaacagtgaagtaaacgacaggtcttttgtggatgacaacttccagttctattttgta
cagcaagaacatttttcagaaggaactaagatgctgatggatgagccattgttaatccca
gaatctcgtaaaattaccgtgcttgtttcctggccagaggaaatgttgaagcggtatgat
acttgcattttaagccatttaccagagacaggtgggctttcatcaaaaaagcctccagag
tcggcttctctgtataaatgtcttgaagcattcttgaaggaagagcctttaggacctgaa
gacatgtggtactgccctaagtgcttgaagcattgtcaagctagcaaaaagttggatctc
tggagattgccagaaattttgattattcatttgaagagattttcatacaaccagtttctc
aaggacaagttggaaacttttgtggacttccccatcgataactttgacctttcaaattac
accgtacacaaggagggccagtcttcttttctgtacaagctgtatgcagtaagtaatcac
tatggtggaatgggtggtggtcactacaccgcttttgttcaatgtgggcagcaatggtat
gagttcaatgacagccaggtcttccccattagtgaggaccaaatcaagacatcagcagcc
tatgttctgttttacaagagaatttga
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