Cynara cardunculus var. scolymus (artichoke): 112521050
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Entry
112521050 CDS
T05604
Name
(RefSeq) transcription initiation factor IIE subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112521050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112521050
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
112521050
Prokaryotic type
Archaeal type
TFE
112521050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Cas12f1-like_TNB
Zn_ribbon_8
A24_N_bact
DUF8255
DUF7836
Zn_ribbon_SprT
HVO_A0261_N
wHTH-PRTase_assc
Motif
Other DBs
NCBI-GeneID:
112521050
NCBI-ProteinID:
XP_024985448
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All DBs
Position
LG_11
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AA seq
461 aa
AA seq
DB search
MSIEPFNKLVKLTARAFYDDITAKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
DLKLHLKQLRRTLRFFEEEKLVTRDHRKETAKGAKAYSAAVAATADNLTGRDGEEKIKLH
THSYCCLDYAQIHDVVRYRLHRMKKKLKDELDNKNTVQEYVCPKCGKRYNALDAIRLISF
EDDSFHCESCNTELVAESDKLASQDIGDGDDNARRRRREKLRDMLQKMEVELKPLMDQLS
RVKDLDAPDYGTLQAWELRASAAARASNADPGANDSSRPGQGGTPMPFLGETKVEVAFSG
VEEKGEIKSESAPMKVLPPWMIKEGMNLTNEQRGGVKQESNMEGTSASIDMKDEKKLSSQ
EDDAKNLQDEYFKAYYAALLQRQKEQEEATKREQDLSMNSVSTDVDPSNSRKRQRDDDGE
GDVEWEETPTAGETFKVDLNVEAAEPSGDDEDDDGIDWEEG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgagccatttaacaaattggtgaagttgacggcgagggcattttacgatgat
attactgcaaaaggagataatcaaccgaaaacaggaaggagcgataatagaggaattgct
gttgttgttcttgatgctctgaccagacgccaatgggtgcgtgaagaagatttagcaaaa
gatttgaagttgcacttaaaacaacttcgacggactttgcggttttttgaagaagaaaag
ctggtaaccagggatcataggaaagagaccgccaagggtgcaaaagcctacagcgctgca
gttgctgctactgctgataatctaactggaagagatggagaagagaagattaagctgcac
acacactcttattgttgtcttgactatgcacagatacatgatgtggtaaggtatagactg
caccggatgaagaagaagttgaaagatgaattagacaataagaacacagtccaggaatat
gtgtgcccaaagtgtggaaaaagatataatgcattggatgctattcgactgatctctttt
gaagatgactcttttcattgtgaaagttgcaatacagaattagtggcagagagtgacaag
ctagcttctcaagatatcggagatggcgatgataatgcaagaagacgacgccgtgagaaa
ttgagggatatgcttcaaaagatggaggtagaactcaagcctttgatggatcagcttagc
agagtaaaggacttggatgcccctgattatggaactcttcaagcatgggagcttcgagca
agtgctgctgcgcgtgcatctaatgctgatcctggtgccaatgattcttctagacctgga
cagggaggaacacctatgccatttcttggagagacaaaggttgaagtggccttctctggt
gtggaagaaaaaggggagataaaatccgaaagtgcccctatgaaagttttgcctccatgg
atgatcaaggaagggatgaaccttacaaacgagcagcgggggggtgtaaagcaagaatca
aacatggagggaacttcagcatctatcgatatgaaagatgagaagaagttgagtagccaa
gaggatgatgcgaagaatctccaggatgagtatttcaaagcatattatgctgctttactt
cagaggcaaaaagaacaagaagaagccaccaagagggagcaagatttgtcgatgaatagc
gtctccactgatgtcgatccctcgaattcaagaaaacgccaacgtgatgatgatggagaa
ggcgatgttgaatgggaagagactccaactgcaggggagaccttcaaggtggacttgaat
gtggaagcagcagagccttctggagatgatgaagatgatgatggcatcgattgggaagag
ggctga
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integrated database retrieval system
