Cynara cardunculus var. scolymus (artichoke): 112521165
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Entry
112521165 CDS
T05604
Name
(RefSeq) cellulose synthase-like protein D4
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112521165
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112521165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
Glyco_tranf_2_3
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112521165
NCBI-ProteinID:
XP_024985642
LinkDB
All DBs
Position
LG 11:4417764..4421748
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AA seq
1121 aa
AA seq
DB search
MASSQPSKKTNKSTGGGGGASSGQNVKFARRTSSGRYVSLSKDDIDASGETSGDYTNYTV
HIPSTPDNQPTETSVATKAEEQYVSNSLFTGGFNSVTRAHLMDKVIDSEVNHPQMAGSKG
SSCSMPACDGKVMKDERGVDIIPCECRFKICRDCFLDAQKDSGLCPGCKEPYKTEDNDDD
PPGGTGTLSLPGPDGKGGDPRQRMSVVKRNQNGEFDHNKWLFNETSGTYGVGNAYWPPEN
GDGDGKSGGLGDPADKPWRPLTRTMPIDAGIISPYRLLIAIRFVVLCFFLAWRIRHPNND
AMWLWFMSIVCELWFGFSWILDQIPKISPVNRSTDLQLLHDKFEMPDRTKNPTGRSDLPG
LDFFVSTADPEKEPPLVTANTILSILAVEYPVEKVACYISDDGGALLTFEAMAEACSFAD
LWVPFCRKHDIEPRNPDTYFSLKGDPTKNKKRTDFVKDRRRVKREYDEFKVRINNLPDSI
RRRSDAFNAREEMKMLKNIRESGVDPLEPIKVKRATWMADGTHWPGTWANPSADHKKGDH
AGILQVMLKPPSPDPLRGSGDDNLIDFSDVDIRLPMFVYMSREKRSGYDHNKKAGAMNAL
VRSSAVLSNGPFILNLDCDHYIYNCMAVREGICFMMDRGGEDICYIQFPQRFEGIDPSDR
YANHNTVFFDGNMRALDGLQGPFYVGTGCMFRRFALYGFDPPKLSMITPEKKGSDGNVSA
PEAQALKATDFDPDLNVNDLPRRFGNSTLLAASIPVAEFQGRPIADHPAVKYGRPPGVLR
NAREPLDATTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSIYCL
TKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNALLASKRLMFLQRLAYLNVGVYP
FTSLFLLIYCFLPALSLFSGQFIVKNLNTTFLVYLLLITLCLIGLAVLEVRWSGVSLEDW
WRNEQFWLISGTSSHLAAVIQGLLKVIAGIEISFTLTSKAVEDTGDTYAELYLVKWTSLM
IPPIVIAMVNVLAMVVAFSRTIYSITPQWGKFIGGSFFSFWVLAHLYPFFKGLMGRRGKT
PTIVFVWSGLIAITLSLLWVAINPNSGMEDAAAGGAGFKFP
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttcccaaccatctaagaagacaaataagagcaccggtggaggtggtggtgca
tcctccggccaaaacgttaaatttgcacgtcgcacatctagtgggcgttatgtgagctta
tctaaggatgacattgatgcatccggggagacatcgggtgattacacgaattacacggtt
catatcccctcaacacccgacaatcaaccaacagagacgtcagttgctacaaaagccgaa
gaacaatatgtttctaattcactcttcactggtggtttcaatagcgtcacacgagcccat
ctcatggacaaagtgatcgattcggaggtgaaccatcctcaaatggcaggatcaaaaggg
tcatcatgttccatgccggcttgcgatggcaaggtcatgaaagatgagagaggcgttgat
attatcccttgtgaatgcaggttcaagatttgtagagactgttttttagatgctcagaaa
gactctgggctgtgcccaggatgcaaagagccatataaaacggaagataatgatgacgat
ccacctggtggcactggaacattgtcacttccgggaccggacggtaagggtggtgatcca
cggcagcgtatgtcggtggtgaagaggaaccaaaatggggaatttgatcacaacaaatgg
ctgtttaatgagacatccggtacatatggagttggaaatgcgtattggccaccagagaat
ggtgatggtgatggaaaaagcggtggtcttggagatccggccgataaaccgtggcggcca
ctcacccggacaatgcctattgatgcaggcatcattagtccttacagattgttgatagca
attcgttttgttgttttgtgtttctttttggcatggagaattaggcacccgaataacgat
gcaatgtggctgtggttcatgtcgattgtttgcgagctctggttcgggttttcttggatc
cttgatcagatcccaaaaatttctccagtcaatcggtccactgacctccagcttcttcac
gacaagtttgagatgccggacaggaccaagaatccgaccggtcgttctgacctccccggt
cttgacttctttgtgtcaaccgccgatccggagaaagagccaccgcttgtcactgccaac
accatcctctcgatcctggcggttgaatacccggttgagaaggttgcttgctacatatcc
gatgacggtggtgcccttctcaccttcgaggcaatggcggaggcttgcagctttgctgat
ctatgggtgccgttttgccggaagcatgacatcgaaccaaggaatcccgacacttatttc
tcattgaagggcgatccaaccaagaacaagaaacggacggatttcgtaaaggatcggagg
agggtgaaacgagagtacgatgagttcaaggtcaggatcaataacttgccggattcgata
aggagaagatcagatgcgtttaacgccagggaggagatgaagatgctgaagaacattcgg
gagagcggtgtagacccattggagccgataaaggtcaaacgggccacatggatggccgat
ggcacgcactggcccggtacttgggctaaccctagcgcggatcataagaaaggtgaccat
gctggtatcttacaagtaatgttgaaacctccgtcccctgacccattacgcgggtcaggg
gatgacaatcttatcgacttctcagatgtcgatataagattgccaatgttcgtgtatatg
tcacgagagaaacggtccggctacgaccataacaagaaagccggggccatgaacgcactg
gtgcgttcctctgcggtcctgtctaacggaccgttcatcttgaacctagactgtgatcat
tatatatacaattgtatggcggttcgagaagggatctgcttcatgatggaccgtggtggc
gaagacatttgctacattcaattccctcaacggttcgaaggaatcgatccctcagaccgt
tacgccaatcataacaccgtcttctttgacggaaacatgcgggcactcgatgggctacaa
ggcccgttttacgtgggaactggatgcatgtttagacgttttgcgttgtatgggtttgat
ccgccaaagctgtcgatgataacccccgaaaagaaagggtccgacggcaacgtatcagcg
cccgaggcacaagcattgaaggcgaccgatttcgatccggaccttaacgtcaatgattta
ccacgacggtttggaaactcgacacttctggcagcatctatacctgtagccgagtttcaa
ggccgtcctatcgctgatcacccggctgtcaagtacggtcgtcctcccggtgtccttcgc
aatgcccgtgaacctcttgatgccactacagttgctgaagctgtttcagttatttcttgc
tggtatgaggacaaaacggaatggggtgatagagtgggttggatctatggatcggtgacg
gaagatgtggtgacgggatatcggatgcacaaccgtgggtggcggtcgatctattgtctc
acgaaacgagatgctttccgtggatctgcaccgatcaatctcaccgatcgtctccatcaa
gttctccgatgggctaccggctccgtcgagatcttcttctctagaaacaatgctcttcta
gcatccaaacgactcatgtttctgcaacgtttagcgtacctaaacgtcggcgtttatccc
ttcacatctctcttcctcctcatctactgcttccttccggcgctttcgctgttttccggc
cagttcatcgtcaaaaacctcaacaccaccttcttagtctacctcttactgataaccctg
tgtttgatcggactcgccgtgttggaagtgaggtggtccggtgtgtctctagaagattgg
tggcggaacgagcagttttggctgatctccggtacgagctctcatttagcggccgtgatt
caagggctattgaaggtaattgccggaatcgagatctcgttcacgttgacttcaaaagct
gttgaagatacaggtgatacttacgcagagctgtatctagtgaaatggacgtcgctgatg
attccaccgattgttatcgcgatggttaacgttcttgccatggttgtggccttctcgagg
acgatctacagcataacgccgcaatgggggaagttcatcggcggttcgtttttcagtttc
tgggttttggctcatttgtatccgttcttcaaaggattgatggggaggagagggaaaacg
ccgacgatcgtgtttgtttggtctgggctcatcgctatcacactctcgctgttgtgggtg
gctattaatcctaactccggcatggaggacgccgctgccggaggagctggctttaaattt
ccgtga
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