Cynara cardunculus var. scolymus (artichoke): 112521171
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Entry
112521171 CDS
T05604
Name
(RefSeq) syntaxin-132-like
KO
K08486
syntaxin 1B/2/3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112521171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112521171
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112521171
Membrane trafficking [BR:
ccav04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112521171
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112521171
Exosomal proteins of other body fluids (saliva and urine)
112521171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Ran-binding
Fusion_gly
T2SSF
DUF7201
Motif
Other DBs
NCBI-GeneID:
112521171
NCBI-ProteinID:
XP_024985649
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All DBs
Position
LG 11:complement(5264346..5268383)
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AA seq
310 aa
AA seq
DB search
MNDLLSASFGSPRRSGHGGGDIEMGIQHASQSGELELDDHFKMVQHIEKEFDVLNKLLKK
LQDAHEESRSVTKAAAMKAIKQRMENDVDEVGRVARFIKAKIEELDKENLINRQKPGCGQ
GTGVDRSRTATTLALKKKFKDRVKEFQTLRESIHQEHREVIERRVFTVTGTRADEETIDR
LIETGNSEQIFQKAIQEQGRGQVVDTLAEIHERHSAAIEVERKLLELQQIFSDLAILVDS
QGEMLDNIETHVSSAVDHVQSGNRALQNAKKLKKNSRKWMCLAIIVLLIVIISVLVGVFK
PWESTNGILA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctcttatctgcgtcgtttggtagccctcgaagatctggtcatggcggtgga
gatattgaaatgggaatacaacatgcttcacaatctggagaattagaactggatgatcat
tttaagatggttcaacacatcgagaaagaattcgacgtgcttaataaacttctgaaaaaa
ctacaggatgctcatgaggaatcgagatccgtaaccaaggctgctgccatgaaagcaatc
aagcagcgaatggagaacgatgttgatgaggttggaagggttgctcgttttattaaagcc
aaaattgaagaactcgataaggagaacttgatcaacagacaaaagcctggatgtgggcaa
ggaactggagtagaccgatcaagaacagcaactacacttgccttgaagaagaaatttaaa
gatagggtgaaggaatttcagacgttaagagaaagcatacatcaagaacatcgtgaggtc
attgagagacgggtgtttacagtaacgggaaccagagctgatgaagagacaattgatcga
ctaatagagacagggaatagcgaacaaattttccaaaaagcaattcaggaacagggacga
ggccaggtggttgacacacttgcagaaatccacgagcgccacagcgcagcaattgaagta
gaaaggaagcttctcgagttgcaacagatattttcagatttggctattttagtggattct
caaggggaaatgctagacaacatagagacacatgtgtcgagtgcggtagatcatgtgcaa
agtgggaacagagcccttcagaacgcgaagaaattaaagaagaactcaaggaaatggatg
tgcttggctattatagttttgctcatagtcatcatatccgttcttgttggcgtattcaag
ccatgggaaagtaccaatggcattttagcttaa
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integrated database retrieval system
