Cynara cardunculus var. scolymus (artichoke): 112521189
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Entry
112521189 CDS
T05604
Name
(RefSeq) plant UBX domain-containing protein 10-like
KO
K18726
FAS-associated factor 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112521189
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112521189
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Gene cluster
GFIT
Motif
Pfam:
UBX
FAF1
UBA_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
112521189
NCBI-ProteinID:
XP_024985669
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All DBs
Position
LG 11:13136745..13141891
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AA seq
458 aa
AA seq
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MSGSADKLAHFQAITGLQDADLCTEILSAHGWDLQQAISSITSTSDSDHATSATDNIAAD
RFEQSGFVAAEGAGPPGLAWKLISLPVSIVSGSLGLVSGAVGLGLWAVGGVLSYSLSMIG
LTNSGRNDGSPSTPLVSLSTAASEAMDFVSKFEGEYGDRHPDFVXEGFMDALQRSRHEFK
LLFVYLHSPDHPDTPSFCEDTLCSEVLSAFVNENFVVWGGNIRASEGFKMSNSLKASRFP
FCAVVMAATNQRIALLQQVEGPKSPEEMLTVLQRVLEESAPVLVTARLDAEERRNNIRLR
EEQDAAYQAALEADQARERQRREEQERLEREAAEAERKQKEEEEARERAAREAAEREAAL
IKLREEKSLSLGPEPEKGPDVTQVLVRLPNGERKGRRFHCSATIQSLYDFVDSSGILEMG
SYTLVTNFPRVLYGPEKLCLTLKEVGLHPQASLFVEQK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttcggctgataaattagctcactttcaagcaattacaggtctccaagacgcc
gatttgtgcaccgagatcctttctgctcatgggtgggaccttcaacaagctatctctagt
attacttcaacatcagattccgatcacgccacttccgctaccgacaatatcgcagccgac
agatttgaacaatcaggatttgttgccgccgagggtgcaggtccaccaggtttagcatgg
aaactcatctcgcttcccgtttccatcgtttctggaagcctagggttagtttccggtgct
gttgggcttggtttatgggcggttggtggtgttctctcttattccctaagcatgatcggg
ttgactaattccggacgtaatgacggatcgccctcgactcctttagtttctctgtcaacg
gcagcatcagaggcgatggattttgtgtccaagttcgagggtgagtatggagatagacat
ccggattttgtttycgagggttttatggacgcgttacagcggtcgcggcatgagttcaag
ctgttatttgtgtacttgcactcgccagatcatcctgatacaccatccttctgtgaggac
actctgtgttccgaggttttgtcagcgtttgtaaatgagaactttgtcgtttggggtgga
aatatcagggcaagtgaagggtttaagatgagtaacagcttgaaggcttccaggtttcct
ttctgtgctgttgttatggcagctactaatcagagaattgctttgctccagcaggttgag
ggacctaaatcacctgaagaaatgcttacagtgttgcagagggttcttgaagaaagtgcc
ccagttcttgtaacagcacggcttgatgctgaggaacgtcgaaataacatacgactgagg
gaagaacaagatgctgcatatcaagctgcacttgaagctgatcaagccagggaacgacag
aggagggaagagcaagaacgactagaaagggaagctgctgaagctgaaaggaagcaaaag
gaagaagaagaggctcgtgaaagagcggcacgtgaagctgctgaaagagaagctgcatta
attaaactgcgtgaggaaaaatcactttctttgggccctgaacctgaaaagggacctgat
gttacacaggtattggttcggctaccaaatggagaacgaaagggaaggaggttccattgt
agtgcaacaatacaatctctatacgactttgttgattcttcaggtatcttggaaatggga
agctacactctcgtcaccaattttcctcgtgttctgtatggtccggagaaactctgttta
acactgaaagaagttggattacatcctcaagccagtctttttgtggagcagaaatga
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