Cynara cardunculus var. scolymus (artichoke): 112521294
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Entry
112521294 CDS
T05604
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112521294
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112521294
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112521294
03036 Chromosome and associated proteins [BR:
ccav03036
]
112521294
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
112521294
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
112521294
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
112521294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
112521294
NCBI-ProteinID:
XP_024985832
LinkDB
All DBs
Position
LG 11:complement(13864716..13873862)
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AA seq
510 aa
AA seq
DB search
MEGEDDVHMATEGLDWKFSQVFGEPAAGEEVQEVDIISAIEFDKSGDHLATGDCGGRVVL
FERINKTDHADHRRDLDGMDCSSSRRPEYRYKTEFQSHEPEFDYLKSLEIEEKINHIRWC
HTANGAMFLLSTNDKTIKCWKVQEKKIKKICHMNIEPPKPTSNGFVSGSNVPTMSKPHTA
NGDGIDKHLRCMSDNVPFPSWRVSSLHLPMVTGHETSLVARCRRTYAHAHDYHINSISNN
SDGETFISGDDLRINLWNMEISNQSFNIVDVKPANMEDLTEVITSAEFHPSHCHMLAYSS
SKGSIRLLDLRQSALCDGHSKLLKEHEAPGARSFFTDIIASISDIKFSKGGRHILSRDYM
TLKLWDINMDSVPVATFQVHEYLRPKLCDMYENDSIFDKFECCLSGDGQRVATGSYSNLF
RVFGCSEGSSEEATLEATKNPTRRQIQTPPRFPRSLGTLPRVSRRGSDNLGIDINGSSYD
FSRKLLHLAWHPNENSIVCAASNSLYMYYA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaagatgatgtgcatatggctacagagggcttagactggaaattctctcag
gtttttggtgagcctgctgctggcgaagaggttcaagaagttgatatcatttcagctata
gaattcgataaatctggagatcatcttgcaactggagattgcgggggtcgtgtggttttg
tttgaaagaatcaacaaaacagatcatgctgatcatcgaagagatctggatggaatggat
tgttctagcagtagacgccctgaatatcgctacaaaacagaattccaaagtcatgaaccg
gagtttgactacctaaagagcttggaaattgaggagaaaatcaaccatatcagatggtgt
catacagctaatggtgccatgtttctgctctcgactaatgataagactataaagtgctgg
aaggtacaagaaaagaagatcaagaaaatatgccacatgaacatagagcctccgaaaccg
acaagtaatggttttgttagtggttcaaatgtgcctacgatgtctaaaccacatactgca
aatggagatggtatcgacaaacacctgcgttgtatgagcgacaatgttccatttccatcg
tggagggtttcatctctacatttacccatggtaaccggccatgaaacaagccttgtagct
agatgccgtagaacatacgcccatgcccatgactatcatattaattccatctcaaataac
agtgacggtgaaacttttatatcgggtgatgatctgcgcataaacctatggaacatggaa
attagtaatcagagtttcaatatcgttgatgtgaagcctgccaacatggaggatttaacc
gaggtgataacttcagctgagtttcatccttcgcactgccatatgttagcgtatagcagc
tcaaaaggctcaattaggcttctagatttacggcaatccgctctatgtgatggccatagt
aaattattaaaagaacatgaggctccaggtgcaagatcttttttcacagatattattgcc
tcaatttctgatatcaagttttcaaagggaggaaggcatatcctaagtcgtgactacatg
actcttaagctgtgggatataaatatggattccgttccagtggcaaccttccaggttcat
gaatatttgagacctaagctgtgtgatatgtatgaaaatgattcaatcttcgacaagttc
gagtgttgtctgagtggagatggacagcgggtggcaacgggttcttacagcaatctgttt
cgtgtttttgggtgttctgagggaagctcagaagaagcaactttagaggcaacaaagaat
cccacgaggaggcaaatacaaaccccaccaagattcccaagatccctcggaacccttccc
cgtgttagcaggcgaggatccgacaacttgggaattgacatcaatggcagcagttacgat
ttctcaagaaagttgctccaccttgcatggcacccaaacgaaaactcaatcgtctgtgct
gcttcaaacagcctgtacatgtattacgcatga
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