Cynara cardunculus var. scolymus (artichoke): 112521330
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Entry
112521330 CDS
T05604
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 4
KO
K19892
glucan endo-1,3-beta-glucosidase 4 [EC:
3.2.1.39
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500
Starch and sucrose metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112521330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccav00537
]
112521330
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
112521330
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccav00537
]
Enzymes
112521330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
112521330
NCBI-ProteinID:
XP_024985887
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All DBs
Position
LG 11:1813004..1815889
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AA seq
489 aa
AA seq
DB search
MRLEMLLGYVLMYGSLSMALGGYVGINIGTDLSNLPSPEQVVAILRSHQIEHVRLFDADN
HLLSALSDTGIEVMISVTNEEVLGIGESPAAAASWINRNVAAFVPSTNITAIAVGSEVLS
TIPHAAPVLVPAMNYLHKALVSSNLNYQIKVSTPMSMDLIPKPFPPSAATFNSSWNSTID
EILDFLRNTNSFFMLNAYPYYGYIQSSGIFPIEYALLQQLSPVKQIVDPNTLFHYDSMFD
AMVDATYNSIAAYNSSVIPIVVTETGWPWAGGANERDATMENAEKFNNNLIRRVLNNSGP
PSQPTIPINSYIYELFNEDKRPGPVSEKSYGVYFSNGTSVYTFSLDASAQTSANSSGGFC
VARKGADTSSLQDGLNWACGPGQANCSGIQSGQPCYMPDTIENHASFAYNDYYQRMRSVG
GTCDFSGTAITTMVDPSYGSCVFTGSTNMSIGGMVPAAFGPEGPPGSMSPSQHPHVWCLF
VATVVALVL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgaaatgttgcttggatatgttcttatgtatggcagtttgtccatggcatta
ggtgggtatgtgggaatcaacattggaactgatctttccaacttaccgtcaccggagcaa
gtggttgcgatacttagatcccatcaaatagaacacgttcgcctttttgatgccgataat
cacctgcttagcgctctttcggacaccggaatcgaagttatgatcagtgtgacgaatgag
gaggttttaggaattggggaatcgccggcagccgcggcttcttggatcaacagaaatgtt
gcggcattcgtaccctcgacaaacatcactgccattgctgttggtagtgaagttctttcg
acaatcccacatgccgccccggttttggttcctgccatgaactatcttcacaaagcctta
gtttcttcgaacctgaattaccaaatcaaagtttcgaccccgatgtcaatggatttgatc
cctaagccgttcccgccatctgccgccacgtttaactcgtcttggaactcgactattgac
gagattcttgactttttaagaaacacaaattcctttttcatgctgaatgcttatccttac
tacggttacatacaaagcagcggtattttcccgattgaatacgcactcctccagcagctc
tcgccggtcaaacagattgttgacccgaatacgctcttccattatgacagtatgtttgat
gctatggtggatgcgacttacaactctatagcagcttataactcctccgtgatcccaatt
gttgtgaccgagactggttggccatgggcgggtggcgctaatgaacgtgatgccaccatg
gaaaatgccgagaaatttaacaataacttgatacgtcgtgtcttgaataactccggccca
ccaagtcagccgacgattcctatcaactcgtatatttacgagctgtttaatgaagacaaa
cgacctgggcctgtctcggagaaaagttacggtgtgtattttagcaatgggacctcggtt
tatacgtttagtttggatgcatcggcccaaacatcggcgaattcttcaggcgggttttgt
gttgcaagaaagggagccgacaccagtagcttgcaagacggtctgaactgggcgtgcggc
ccaggccaagccaactgcagcggtattcagtcaggacagccgtgttatatgccagatacc
attgaaaaccatgcttcgtttgcttacaacgattactaccaaagaatgcgtagtgtcggc
ggaacctgcgattttagcggtaccgctataactacgatggtcgatcccagttacgggtcg
tgtgtatttacaggaagtacgaatatgagcattggtggaatggttccagctgcatttgga
ccagagggacctcctggaagtatgtcaccgagtcaacatcctcacgtctggtgcttgttt
gtggccacggttgtagcgttggtcctgtag
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