Cynara cardunculus var. scolymus (artichoke): 112521378
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Entry
112521378 CDS
T05604
Name
(RefSeq) syntaxin-121-like
KO
K08486
syntaxin 1B/2/3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112521378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112521378
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112521378
Membrane trafficking [BR:
ccav04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112521378
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112521378
Exosomal proteins of other body fluids (saliva and urine)
112521378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Spectrin
Synaptobrevin
MutS_III
T2SSF
MCPsignal
SSF
NPV_P10
Prominin
SKA2
RmuC
PigL_N
Motif
Other DBs
NCBI-GeneID:
112521378
NCBI-ProteinID:
XP_024985973
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All DBs
Position
LG 11:5066020..5067408
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AA seq
334 aa
AA seq
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MNDLFSGSFSRFRSEEPSPPSHHQNNIEMTGNMPSTGGVNLDKFFEDVEAIKDELRALET
LHNQLQSSNEHSKTLHNAKSVKELRSKMDNDVAISLKKAKFIKVRLEALDRSNAANRSLP
GCGPGSSSDRTRTSVVNGLRKKLSDSMNSFNDLRNKMATEYRETVQRRYYTVTGENPDES
TVDTLISTGQSETFLQKAIQEQGRGQVMDTILEIQERHDAVKEIERNLKELHQVFMDMAV
LVESQGEQLDDIENQVNRASSFINRGTTHLQVARKHQKNTRKWACFGIVLVLIVILIIIL
SIRPWENSGGGGGGGNNNSTPTLSPPPPPPPPST
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctgttttctggatcgttctctcgtttccgcagcgaagagccatcgccgccg
tctcatcatcagaacaacatcgagatgacaggtaacatgccctccactggtggtgtcaac
cttgataagttctttgaagatgttgaggcgattaaggatgagttacgagcacttgagacg
ctgcataatcagcttcaatcgtctaacgaacatagcaaaaccctacataacgctaaatct
gtgaaagagcttagatctaagatggataacgacgtcgctatctcactcaagaaggccaag
ttcatcaaagtccgtctcgaagccctagatcgttccaacgccgccaatcgtagtctccct
ggatgcggacctggcagctcttcagatcgaactcggacctctgtagtcaacggcctccgt
aagaaactctctgattcgatgaactccttcaacgatctgcgtaataaaatggctacagag
taccgtgaaaccgtccagcgacggtactacaccgtcaccggcgaaaatccggacgaatcg
acagtagatacgctgatctccaccggacaaagcgagacttttctgcaaaaagcgattcag
gagcaggggagagggcaagtgatggacacaatccttgagatccaggaacgacacgacgcc
gttaaagagatcgagaggaatctgaaggaattgcatcaggtgtttatggacatggcggtg
ctggtggagagtcaaggggagcaattggacgatattgagaaccaggtaaaccgtgccagc
tcgttcatcaaccgtggtaccacacacttacaggttgcacgtaagcatcagaaaaacacc
aggaaatgggcctgttttgggattgttttagtgttgattgtcattcttattatcatactc
tccatcaggccttgggagaacagcggtggcggtggaggtggcggcaataacaattccaca
cctaccttatcaccaccaccgcctccaccaccgccatccacttga
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