Cynara cardunculus var. scolymus (artichoke): 112521428
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Entry
112521428 CDS
T05604
Name
(RefSeq) small GTPase LIP1
KO
K07933
Rab-like protein 3
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ccav04031
]
112521428
GTP-binding proteins [BR:
ccav04031
]
Small (monomeric) G-proteins
Unclassified
112521428
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Roc
Ras
Arf
MMR_HSR1
Gtr1_RagA
AAA_16
GTP_EFTU
RsgA_GTPase
SRPRB
AAA_22
ABC_tran
Septin
NACHT
AAA_7
AAA_5
nSTAND1
MCM
Dynamin_N
AAA
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
112521428
NCBI-ProteinID:
XP_024986053
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All DBs
Position
LG 11:13623169..13630863
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AA seq
335 aa
AA seq
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MFWREREREINKEQNGGPPCGQVRVLVVGDSGVGKTSLVNLIVKGTSTARPPQTIGCTVD
VKHFTYGTPSSSSDSIKGDKDREFFVELWDVSGHERYTDCRSIFYSQINGVIFVHDLSQR
RTKTSLKKWAAEIAATGTFSAPLANGGPGGLPVPFLVIGNKADIAVKEGTRGSSGNLVDM
ARQWVEKQGLLPSNEELPLIDSFPGSGGLMAAAKEARYDKESVLKFFRMLVRRRYFSDEL
PMASPWSTSVQRPLQRPGDNLSDDDQLYTSTRTIGEAYKYNVLPPLPAQRNLTPPPTLYP
QQPVLTPDNYNIPRFTLSGVQEINNIRSKRNDINV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagggagcgcgaaagggagatcaacaaagagcaaaatggaggccctccttgt
gggcaggttcgagttcttgttgttggggactcaggtgtgggaaaaacttctcttgttaat
ctgattgtgaaaggtacatcaacagcacgtcctcctcaaacaattgggtgtacagtagat
gtgaagcattttacttatggaactcctagtagctcttcagatagcattaaaggcgacaag
gatagagaattcttcgttgaactctgggatgtctctggacatgaacgatatacagattgt
cgttccatcttttattctcaaataaatggtgttatttttgtacatgatctctctcaaaga
aggacaaaaacaagtttgaagaaatgggccgcagagattgcagcaactgggacattttcg
gcccctctagcaaatggcggtcctggtggcctccctgtaccattcctcgtcattggtaac
aaagcagacatagctgtgaaagaaggcacaagaggtagcagtggcaatcttgttgacatg
gctcgccaatgggttgagaagcagggtttgcttccatcaaatgaagaacttcctctgatc
gacagttttcctggaagcggagggcttatggcggctgcaaaagaagcaagatatgacaag
gagtctgtgttgaagtttttccgtatgttggtaagaagaaggtatttttcagatgagtta
cctatggcaagtccatggtctacctcggtacaaagaccattgcagaggcctggggacaat
ttgagtgatgatgatcaattatacacgagtacaaggacaattggtgaggcctacaagtac
aatgttctaccaccacttccggctcaacgcaatctgacgccacctcccacgctttatcct
cagcagccggtgttgacacccgataactacaacatcccaagattcacgttgagcggagtt
caagaaataaacaatattagatcgaaacgaaatgatattaatgtatga
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