Cynara cardunculus var. scolymus (artichoke): 112521459
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Entry
112521459 CDS
T05604
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00061
Fatty acid biosynthesis
ccav00071
Fatty acid degradation
ccav01100
Metabolic pathways
ccav01212
Fatty acid metabolism
ccav04146
Peroxisome
Module
ccav_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
112521459
00071 Fatty acid degradation
112521459
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112521459
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ccav01004
]
112521459
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112521459
Enzymes [BR:
ccav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
112521459
Lipid biosynthesis proteins [BR:
ccav01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112521459
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of breast milk
112521459
Exosomal proteins of breast cancer cells
112521459
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112521459
NCBI-ProteinID:
XP_024986103
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Position
LG 11:12643683..12656696
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AA seq
659 aa
AA seq
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MESKKFIVEVEPAIEEKDGKPSMGPVYRSVFAKDGFPPPIDDLNSCWDIFRLSVEKYPDN
KMLGTREFVDGKHGKYVWLTYKQVYNKVILVGNSIRACGVEPGGKCGIYGVNCPEWIMSM
EACNAHGLYCVPLYDTLGADAVEFIICHAEVTIAFVEEKKIPEVLKAFPKAGEYLKTIVS
FGKVTPEQREQFNKFGLTIHSWDEFLSLGNNKQFDLPVKNKSDICTIMYTSGTTGDPKGV
LISNNNIVTLISGVQRLLECANESLTTYDVYLSFLPLAHIFDRVIEECFINHGASIGFWR
GDVKLLIEDIGVLKPTIFCAVPRVLDRIYSGLQQKISSGSYFKHKLFDIAYSYKLHHMKG
GSKHSEASLLSDRLVFSKVKQGLGGRVRIILSGAAPLAPHVESFLKVVACSHVLQGYGLT
ETCAGSFVSLPNEMSMVGTVGPPVPNLDARLESVPEMNYDALSSMPRGEICIRGGTVFSG
YHKREDLTKEVLVNGWFHTGDIGEWQPDGSMKVIDRKKNIFKLSQGEYVAVENLENIYGL
VPAVDEIWIYGNSFESCLVAVVHPNKHAIESWAHAYDISGDFASLCENPKAKDYILGELN
RIGKEKKLKGFEFIKAMHLDPVPFDIDRDLVTPTLKKKRPQLLKYYQSRIDDMYKSIKK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaagaaatttatagtagaggttgaaccggccatagaggagaaagatggaaag
ccatcaatgggacctgtttaccgtagtgtgttcgctaaagacggctttccacctccgata
gatgatttaaattcctgttgggatattttccgcttgtcagtggagaaatatccagataac
aaaatgcttgggacccgtgaatttgtggatggaaagcatgggaagtatgtgtggttgacg
tacaaacaagtatataacaaagtgatactggttggaaattctatccgtgcttgtggagtt
gagccaggaggaaagtgtggtatctatggtgtcaattgccctgaatggattatgagcatg
gaggcatgtaatgctcatggcttatactgtgtgccattatatgataccttaggtgctgat
gcagtagaattcatcatatgccatgccgaggttacaattgcttttgtagaagaaaaaaag
atccctgaggtactaaaagcatttccgaaagctggagaatatctgaaaactattgtgagc
ttcggaaaagttactcctgagcaaagggaacaattcaacaaatttggtttgacaatacat
tcatgggatgagttcttgtctttgggcaacaacaaacagtttgatctgccagtgaagaac
aaatctgacatctgtacgatcatgtacacgagtggaacgactggtgatcctaagggtgtt
ctgatttccaataacaacattgttacactaatatctggtgtccagcgtctgctagagtgt
gctaatgagtcattgactacgtatgatgtatatctctcatttctacctctagcacatata
tttgatcgggtgattgaagaatgttttataaatcatggggcttcaataggattttggcga
ggggatgtcaaattactgattgaagacattggggtgctgaaacctactattttctgcgct
gttccgcgggtcttggatagaatttattcaggtttgcaacagaagatttcttctggtagc
tatttcaaacataaattgtttgatatagcctattcatataagttgcatcatatgaagggt
gggagtaaacattcagaggcatctctattaagtgacagacttgttttcagtaaggttaag
caggggctaggtggaagagtacgcattattctatcaggggctgccccacttgctccacat
gtagaaagttttctgaaagtggttgcatgcagtcacgtccttcaaggatatggtctgact
gaaacttgtgcgggatcatttgtttcgctgccaaatgaaatgagtatggtgggtacagtt
ggacctccagtaccaaatttggatgctcgtttggagtctgtccctgaaatgaattatgat
gctctttcaagcatgccacgtggagaaatatgcattagggggggtactgtgttttcaggg
tatcacaagcgtgaggaccttacaaaagaggtcttggttaatggctggttccatacaggt
gatattggtgagtggcaaccagatggaagcatgaaagttatcgaccgcaagaaaaacata
tttaagctctcacaaggagaatatgtagcagttgaaaacttggaaaatatttatggactt
gttcctgccgtcgatgaaatatggatatacggaaatagctttgagtcttgtctggttgct
gtggtacacccaaataagcacgcaattgaaagctgggcgcatgcatatgatatatctgga
gattttgcttctttgtgtgaaaatcccaaggctaaagactacatacttggagagctaaat
aggatcggaaaagagaaaaagctaaaagggtttgagttcattaaagcgatgcacctcgac
cctgtaccttttgacatcgatcgggaccttgtcacgccgacattgaagaagaaaaggccc
cagttgctcaaatattaccagagtagaattgatgatatgtacaagagtattaagaagtga
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