Cynara cardunculus var. scolymus (artichoke): 112521462
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Entry
112521462 CDS
T05604
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112521462
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112521462
Ion channels [BR:
ccav04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112521462
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Cation_ATPase_C
IQ
Motif
Other DBs
NCBI-GeneID:
112521462
NCBI-ProteinID:
XP_024986105
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Position
LG 11:complement(3090340..3093921)
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AA seq
711 aa
AA seq
DB search
MSYANSRSVRFQDDIEPPKFQSVNGDNMFKVKYNIDGKQLPESRKPEKRIEKNPRSSLKS
KVLSRVFSEDYERVKKKILDPRGLTIRKWNKIFLMACFVSLFVDPLFFYLPSVKDNVCID
IGFTLEVSLTIVRSVADVFYMIQIYMKFVTAYVAPSSRVFGRGELVIDSSKIAKRYIKGD
LWIDLLAALPLPQVLIWIIIPSLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLMSKIVQS
TGVVTETAWAGAAYNLMLYMLASHFIGACWYLLSIERQEDCWRIVCLAEDPSCEDQFFDC
KRISEPSRRSWFQTSNVTNQCVPTSDFYPFGIYGEALDAEVTSALFFNKYFYCLWFGLKN
LSSLGQDLMTSTYVGEIMFAIVTAVVGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTE
QWMHHRQLPPELRQAVRRYDQYKWVATRGVDEESLLKGLPLDLRRDIKRHLCYDLVRRVS
LFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIVRGNLDSYTTNGGRTGFFN
SCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKANSEVEAFALIAEDLKFVASQFRRL
HSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKRRKSVRELKARESFTSVDYESGASSPVH
GRNNMASPDPGFGAYVKRVGASRRPDGSKAGGGGSLQKPAEPDFSVDEEDH
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgccaattcaagatccgtaaggtttcaagatgatatcgaaccaccaaagttc
caatccgttaatggcgacaacatgtttaaggttaaatacaacattgatggaaagcaacta
cctgaatcaagaaaacccgaaaaaagaatcgaaaaaaacccgcgatcctcgttaaaatcg
aaagttctatctcgggttttctccgaggattacgagcgagtgaagaagaaaatcttggat
cctcgaggtttaaccattcgaaaatggaacaagattttcttgatggcatgtttcgtttcg
ctattcgtagacccgttgttcttttacttgccgtcggtaaaagacaacgtttgtatcgac
attggattcaccctcgaagttagtctcaccattgttagatcagtagccgatgtgttttac
atgattcagatatacatgaagttcgtaaccgcgtatgtagcgccatcttcccgcgttttt
ggaagaggtgagctcgttatagactcttccaagatcgcgaaaaggtacataaagggggat
ctttggatcgatcttctagctgcattacctcttcctcaggtgctaatttggataattata
ccgagtttaagtggctcgacgatggcaaacacgaagaacgttctccgattcatcatcatc
tttcaatacctccctagactctatcttatcttccccctcatgtcgaagatcgtccaatct
acaggtgttgttacagaaacagcttgggctggagctgcttataacttgatgctgtacatg
ttggcaagccattttataggagcttgttggtatcttttatcgatcgagaggcaagaagac
tgctggagaatcgtatgtcttgccgaggatccatcgtgtgaggaccagttttttgattgc
aaaagaattagcgaacccagtagacgctcgtggttccagacgagcaacgtgacaaatcaa
tgtgtacccaccagcgacttttatccgttcggtatctatggggaagcattggatgcagaa
gttacttcggctttgttcttcaataagtacttctattgcctttggtttggcttgaagaat
ctcagttctttgggacaagatttgatgacgagcacttacgttggtgaaatcatgttcgcg
atagtaaccgcggttgtgggactggttctattcgcgttgttaatcggaaatatgcagacg
tatcttcaatcgacaacggttcgattagaagaatggagaatcaggagaaccgatacagaa
cagtggatgcaccaccggcaactgccgccagaactacggcaggccgttcggagatatgat
cagtataaatgggttgcgactcgaggggtggatgaagaatcccttctcaaaggcctcccg
ttagatcttcgtcgagatataaaacgccacctttgttacgatcttgttcgacgagtatcg
ttgtttgatcaaatggacgaacggatgctggatgcgatttgcgagaggctaaaaccggca
ttatgtactcaagggacttgtttagtgcgggaaggagatccggtgaacgaaatgttgttt
atcgttcgaggaaacctcgattcgtacaccacgaatggtggtcggaccgggtttttcaat
tcgtgccggattggtccaggtgacttctgtggcgaagaacttttgacgtgggccctggac
ccacgcccgagcgtcatccttccatcgtccacccgcacggtgaaggccaattctgaagtc
gaagcttttgctctcatagcagaagatttgaagtttgtggcatcgcaattccgtagattg
catagtaagcaactacgacacaagtttcggttttacagccaccagtggcggacgtgggcg
gcttgtttcatccaagcggcatggcggcggtataagcggaggaagagtgttagggaactc
aaggctcgtgagagctttacgagtgttgattacgagtcaggagcaagctcaccggtgcat
ggtaggaacaatatggcgtcaccggaccctgggtttggtgcgtacgttaagagggttggt
gcgagtaggaggccggatggctcgaaagcaggtggtggtggttcgttgcaaaagccagca
gaacctgatttttctgtagatgaggaggaccattga
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