Cynara cardunculus var. scolymus (artichoke): 112521491
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Entry
112521491 CDS
T05604
Name
(RefSeq) two-component response regulator ARR2-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112521491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112521491
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
112521491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
112521491
NCBI-ProteinID:
XP_024986153
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All DBs
Position
LG 11:9348251..9351315
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AA seq
514 aa
AA seq
DB search
MNRAIQRLMMPGSSSASWKSAAASAVGVPDQFPAGLRVLVVDDDPTCLMILEKMLKNCNY
EATICNRAEIGLSFLRENTNGYDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSK
SVVMKGVTHGACDYLIKPVRIEALRNIWQHVVRRRKHEWKDFEPLTSADDADQVPKPRED
LDVSSSANEGNNWKNAKRRKDDEDEAEEPDSSSSSKKPRVVWSVELHQQFVAAVNQLGID
KAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGSQHLGSIDGSFMGSPDMGYGSMS
SLNGIDLQALAVGGQSLATLQAAVLGHPNNSKSPVSVPILDQRNIFSFENPKLKYQEVNT
QQLLHGIPTNIEPMQFAGLHQSRQHSFNNVNGRVLITTAGQSQCQNQSNSNHLPVLPNGI
LAHGSGSKVPRGGMIPSYNVPNDLNQMRTHDSGFESDLMKAKAESILLYPEQYNQEDLLT
AVLKQQQQQQQQGFGEAENEFGLNGYAVLDDLPV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtgcaattcaaagattaatgatgcctggttcaagttctgcttcttggaaatcc
gccgctgcctctgccgtcggtgtaccagaccaatttccggcaggtctccgggtgcttgtt
gttgatgatgacccaacttgtctcatgatcttagagaagatgctaaaaaattgcaactac
gaagcaactatatgcaatagagctgagattggtttatcattcttgagggaaaacacaaat
gggtacgatatagttctgagtgatgttcatatgccagatatggatggattcaaacttctt
gaacatattggcctcgagatggacctccctgttatcatgatgtcagcagatgatagcaag
agtgtagttatgaagggggttacgcatggtgcttgtgattatttgataaaacccgttcgg
attgaggcattgcgtaacatctggcaacatgtggttcgaagacggaaacacgagtggaaa
gacttcgagccgttaacaagtgcagatgatgctgaccaagtgccgaaaccccgtgaagat
ctcgacgtttcgtcttctgcaaacgaagggaataattggaaaaatgcaaagcggaggaaa
gacgatgaggatgaagccgaggaaccagacagctcttcttcttcaaagaagcctcgtgtc
gtttggtccgtcgagctacatcaacagtttgtagcagccgttaatcagcttggaatcgac
aaagctgttccgaagaaaatcttggagctgatgaacgttcccgggctaacaagagaaaac
gtcgctagccatcttcagaaataccgtctatatcttagacggctcagtgggtcgcagcat
ttgggatcaattgatggctcgtttatgggtagtcccgatatgggatatgggtcaatgtca
tcactcaacgggatagatcttcaagctttagccgttggtggtcaaagccttgcaacactc
caagctgcggttcttggtcatccaaataactcgaaatctccggtttccgtgccgatcctg
gatcaaagaaacatatttagtttcgagaatccaaaattgaaataccaagaagtcaacact
caacaattacttcatggcatcccaacgaatatagaaccaatgcagtttgcaggcttgcat
caatctcggcagcattcattcaacaacgtcaacggtcgagtactgattacaacagctggt
caaagccaatgtcaaaatcaatcgaacagcaatcatctgcctgttttacccaatggaata
ttggcacatggctcggggtcaaaggtcccgagaggtgggatgattccaagttacaatgtt
ccgaacgatttgaatcagatgagaacacacgattcgggatttgaatcagatctgatgaag
gccaaggcagaaagcattttgctgtatcctgagcaatacaatcaagaagatcttctaact
gcagttcttaagcagcagcagcagcagcagcaacaaggctttggagaggcggaaaacgag
tttgggttaaacgggtacgcggtgttggatgatcttccggtttaa
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