Cynara cardunculus var. scolymus (artichoke): 112521622
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Entry
112521622 CDS
T05604
Name
(RefSeq) transcription factor RAX2-like
KO
K09422
transcription factor MYB, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112521622
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112521622
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
CR_prot_dom_plant
Dscam_C
Motif
Other DBs
NCBI-GeneID:
112521622
NCBI-ProteinID:
XP_024986358
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Position
LG 11:complement(3236212..3238170)
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AA seq
366 aa
AA seq
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MGRAPCCDKASVKKGPWSPEEDAKLKDFIEKFGTGGNWIALPQKAGLKRCGKSCRLRWLN
YLRPNIRHGEFSDDEDRIICSLYATIGSRWSVIAAQLPGRTDNDIKNYWNTKLKKKLLTM
LPSLQEKPTLFPSMPFQPPYDDHHHHTSDHFLTTSSSFYTNYTPNFMSVDTTSNSLLVQD
NDHVNVANLSSPPPPPPPENHLISLLGNNTIDVNENSYNSYLGFQDDHQSMCNSPMQECY
HPVSAMKEGMLMFGGGATCSSSEGGSCMSQISHGNYNKDHHQKQQYQIKQEDQITLQEQV
LGDQTQSLQGFIINQKPKEYMIKNHVSPLNNDLEEVKQLNFNSYMFHDGDESKTTHYQKG
MCSYYY
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggggagagccccttgttgtgacaaagcaagtgtgaagaaagggccatggtctcctgaa
gaagatgcaaaactcaaagacttcattgagaaatttggtactggtggtaactggattgct
ctccctcaaaaagctggtctcaaaagatgtgggaagagttgcaggttgagatggctaaac
tatctcagacccaatatcaggcatggtgaattctctgatgatgaagacaggatcatctgc
agcttgtatgctacaattggtagcagatggtcggtaatagcagctcagctaccgggaaga
actgacaatgatatcaagaattattggaacactaaactgaagaagaagctgttgactatg
cttccctcacttcaagaaaaaccaactctttttccatctatgcccttccaaccaccatat
gatgatcatcatcatcatacatcagaccacttcttgactacttcatcatcattctacacc
aattatacccctaactttatgagtgttgacaccacttccaactctctccttgttcaagat
aatgatcatgttaatgttgccaatctctcatcaccaccaccaccaccaccacctgaaaac
catttgatcagtttgctgggcaacaacaccattgatgttaatgaaaactcttataatagt
tatctagggtttcaagatgaccatcagagcatgtgcaacagtccaatgcaggaatgctac
catcctgtatccgccatgaaagaaggcatgctcatgtttggaggtggtgcaacttgttct
tcatctgaaggtgggagctgcatgagccaaatcagtcatgggaattacaacaaagatcat
catcagaagcagcagtatcagatcaaacaagaagaccaaataactcttcaagaacaggtt
cttggagatcaaactcaaagcctgcagggtttcataatcaatcagaagccaaaagagtac
atgatcaagaaccatgtaagtccattgaacaatgatcttgaggaagtcaagcaactcaac
ttcaacagctacatgttccatgatggtgatgaaagcaagacaacacattatcagaagggg
atgtgctcctattattactga
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